CX043995

Overview
NameCX043995
Unique NameCX043995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.873e-43
Identity = 95/226 (42.04%), Postives = 136/226 (60.18%), Query Frame = -2
Query:  121 DPSTMVFFTLKDLKIGETM--PIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTK---STTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 783
            DP   +FF  K+L+ G+ +   ++F     +   + LPR +ADSIPFS K+LP +L  F     S  A  M  TL  CE+P  +GE K CATSLES++DFV  +FG  +     +T  L+K   S+++ Q+YT+  V +     +++ACH   YPYA+F CH      + +  SL G +G  VEAVAVCH DTS W+ +HA+F VLG++PG+  VCHF Q D +V+
Sbjct:  357 DPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGA-SDVDAASTVVLSKAVESSSLAQDYTVSGVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.568e-41
Identity = 95/226 (42.04%), Postives = 131/226 (57.96%), Query Frame = -2
Query:  121 HMDPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFA---PKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 789
            H DP+  +FF  KDL  G+TM ++F     +A  + LPR EAD++PFS +++P +L  FS    S  A  M  TL  CE PP +GE K CATSLESM+DF   T  L T      +T + K  +  Q YT+  V +        ++VACH  PY YA+F CH      + + VS+ G +G  VEAVAVCH DT+ W+  H +F VL ++PG+  VCHF   D++V+
Sbjct:  205 HDDPNVALFFLEKDLHPGKTMAVHFTAT--TAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDF--ATSSLGTSHVRAASTVVGKEGSPEQEYTVTAVKRAAAGGDQDQLVACHAEPYAYAVFACHLTRA-TRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.052e-37
Identity = 92/224 (41.07%), Postives = 131/224 (58.48%), Query Frame = -2
Query:  121 DPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLT--KSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHSQMTE-NKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 783
            DP+  +FF   +L+  +++ ++F      A  + LPR EAD++PFS K L  +L  F     S  A  ++ TL  CE+P  +GE K CATSLESM+DFV  + G  T+     +TFL      T  Q YT+    +     +++ACH   YPYA+F CH  +TE  + +  SL G +G  VEAVAVCH DT+ W+  HA+F VLG++PG+  VCHF Q D +V+
Sbjct:  103 DPTMGLFFLETNLQSSKSIKLHFANM--MAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLG--TRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCH--LTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36
Identity = 89/226 (39.38%), Postives = 124/226 (54.87%), Query Frame = -2
Query:  121 HMDPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQA-LPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLN-TTFLTKSTTIFQNYTILQVP-KPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 789
            H DP+  +FF  KDL  G+ M + F   D      A LPR EA+++PF  ++    L+ FS    S  A+ M+ T+  CE   + GE K CATSLESM+DF     G   K+ V   +T + K     Q Y I     K +   K V CH   YP+A+FYCH  M    ++ V L G+NG R +AVAVCH +TS W+ +H +F VL ++PG+  VCHF    ++V+
Sbjct:  168 HDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLG---KYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTT-VYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.418e-36
Identity = 83/220 (37.73%), Postives = 122/220 (55.45%), Query Frame = -2
Query:  121 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNG-DRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 777
            +T VFF  + +++G  +P +F    P+A    LPR+ ADS+PF+   LP +L  F  + DS    +ME TL  CE P I GE+K CATSLE++++   G  G      V +T  L ++    Q YT++ V      P  VACH   YPY ++ CH+    ++ + V + G  G D V   AVCH DTS W+ +H SF +LG +PG + VCH     +I++
Sbjct:  138 TTTVFFHEEAVRVGRRLPFHFPPATPAALG-FLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTST--LPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHT-TGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 353          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.166e-34
Identity = 80/219 (36.53%), Postives = 114/219 (52.05%), Query Frame = -2
Query:  121 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 777
            +T VFF  + +++G+ +P  F    P+A    LPR+ ADS+PF+   LP +L  F  + DS    +ME TL  CE P I GE+K CATSLE++++      G      V +T  L ++    Q YT+  V      P  VACH   YPY ++ CH+            G   GD V    VCH DTS W+ +H SF +LG +PG + VCH     +I++
Sbjct:  165 TTTVFFHEEAVRVGKRLPFRFPPATPAALG-FLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTST--LPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 380          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.971e-33
Identity = 84/225 (37.33%), Postives = 117/225 (52.00%), Query Frame = -2
Query:  121 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCH------SQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVY 777
            +T VFF  + +++GE +P YF     SA    LPR  ADSIPF+   LP +L  F  + D+  A  M  TL  CE P + GE+K CATSLE++++      G      + +T  L +     Q Y +  V  P+     VACH   YPY ++ CH      + M E +  G   GGD G+ V    VCH +TS W+ +H SF +LG +PG S VCH     +IV+
Sbjct:  186 TTTVFFHEEAVRVGERLPFYFPAATTSALG-FLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALAST--LPRGGAPLQAYAVRAV-LPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDG---GGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVW 403          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.737e-32
Identity = 87/223 (39.01%), Postives = 118/223 (52.91%), Query Frame = -2
Query:  118 DPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQV-PKPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVYI 783
            D    VFF  KDL  G  M ++F +    A    LPR  ADS+PF+ ++LP +L   S    SP A AM  TL  CE  P  GE K CATSLESM++F   + G       ++T       T  Q Y +  V P P+    MVACH M Y YA+F CH+  T    + V+L G +G + EA+A CH D +   R   ++  LG+ PGS  VCHF   D+++++
Sbjct:   22 DTVNNVFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTR-DVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHT--TTAAAYTVTLAGADGTKAEALAACHTDAA--PRVAEAYKRLGVAPGSVPVCHFLPQDDMLWV 237          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.596e-28
Identity = 84/224 (37.50%), Postives = 110/224 (49.11%), Query Frame = -2
Query:  118 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGET-----KICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQV-PKPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRVEAVAVCHMDT-SHWSRDHASFLVLGIEPGSSHVCHFFQADNIVYI 768
            VFF  KDL  G  M ++F +    A    LPR  ADS+PF+ ++LP +L   S    SP A AM  TL  CE   I  ET       CATSLESM++ V  + G      V          T  Q Y +  V P P+    MVACH MPY YA+F  H    +   + V+L G +G   EAVA CH D   H      ++  LG+ PG   VCHF   D+++++
Sbjct:   66 VFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVPVPGGDMVACHRMPYAYAVFGVHG--IKGAAYTVTLAGADGTMAEAVAACHGDVDGHGVAVAEAYKRLGVAPGKVAVCHFLPQDDMLWV 285          
BLAST of CX043995 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23
Identity = 70/220 (31.82%), Postives = 104/220 (47.27%), Query Frame = -2
Query:  112 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHSQMTENKLFGVSLGGDNGDRV--EAVAVCHMDTSHWSRDHASFLVLGIEPGSSHVCHFFQADNIVYIPA 765
            FF  K LK G  MP+   K D       LPR  A  +PFS  ++  L + F  ++DS +AK +   L+ CE  P  GETK C  S E M+DF     G     +    T  +K   +  +   +   K     K V+CH   YP  ++YCHS + + +++   +   N        VA+CH+DTS W   H +F+ LG  PG   VCH+   +++ +  A
Sbjct:  414 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGK---VTKSVSCHQTLYPSLLYYCHS-VPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTWATA 628          
The following BLAST results are available for this feature:
BLAST of CX043995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
BURPH_ORYSJ4.873e-4342.04BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP3_ORYSJ1.568e-4142.04BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP5_ORYSJ1.052e-3741.07BURP domain-containing protein 5 OS=Oryza sativa s... [more]
RD22_ARATH1.983e-3639.38Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
RAF1B_WHEAT4.418e-3637.73Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
RAF1A_WHEAT3.166e-3436.53Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURPD_ORYSJ5.971e-3337.33BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP6_ORYSJ1.737e-3239.01BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP2_ORYSJ2.596e-2837.50BURP domain-containing protein 2 OS=Oryza sativa s... [more]
GP2_SOLLC1.474e-2331.82Polygalacturonase non-catalytic subunit AroGP2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G04_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G04-N8-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043995 ID=CX043995; Name=CX043995; organism=Citrus sinensis; type=EST; length=817bp
TCTTTTTCAGAAATCGAAAATCATTTATTACCAGCAAGATTTATTATTAT
ACGCTAGACATATGGCTTTAACAGTCACATTACCAATACATTTTTAATCA
TGGTAGGTAGGTGCTGGAATGTATACAATATTATCAGCCTGGAAGAAATG
GCAGACGTGGGAGCTCCCTGGCTCGATCCCAAGCACAAGAAACGATGCAT
GATCTCGACTCCAATGAGACGTATCCATGTGGCAAACTGCTACAGCTTCC
ACTCTATCTCCATTATCACCACCTAATGAAACACCGAATAACTTGTTCTC
AGTCATTTGGCTGTGGCAGTAGAAGATTGCATAAGGGTAAGGCATGATAT
GACATGCCACCATCTTGGGAGCAAACATTGGTTTAGGCACTTGTAAAATA
GTGTAATTTTGGAAAATGGTAGTTGATTTTGTGAGAAATGTTGTGTTTAG
AACTTGGAATTTGGTCTCCAATCCGAAAGTTCCGTGTACAAAATCAAGCA
TGGATTCCAAAGAGGTAGCACAAATTTTGGTTTCTCCTTCGATGGGAGGA
ACTTCGCAATGATTCAGGGTCCCTTCCATGGCTTTGGCTAGGGGTGAGTC
ATCTGAGAACGAGAAGAATTGAAGAAGGTAAGGCAGTTGTTTCAATGAAA
ATGGAATGGAATCTGCTTCTTCTCTAGGCAAAGCCTGAGGATAAGCTGAA
GGATCTCTCTTGCGAAAATAAATCGGCATCGTTTCGCCAATCTTTAGATC
CTTCAAGGTGAAGAATACCATCGTTGAAGGGTCCATGTGATTCATGTGGG
ATGGTATTGAATGAGAA
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