CX043985

Overview
NameCX043985
Unique NameCX043985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043985 vs. ExPASy Swiss-Prot
Match: ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.912e-28
Identity = 90/243 (37.04%), Postives = 103/243 (42.39%), Query Frame = -1 
Query:  161 HCLEPWTKRKRSKRPHNPPTEEEYLALCLVMLARGTTSTAVLTNCNTTTAASQRQKXXXXXXXXXXXXSDQKLLFKCSVCDKAFSSYQALGGHKASHR--KGSGGGDEHXXXXXXXXXXXXXXTGV-----------PNATGRTHECSICHKSFPTGQALGGHKRCHYDGG-----------EKXXXXXXXXXXXXXXXXHRDFDLNLPVLPEL------SPAFFVSGDDEVESPLPAKKPRL 799
            H L+ W KRKRS+R  +   EEE LALCL+ML+RG           +  A    +                   FKCSVC K+FSSYQALGGHK SHR  + S   D                                AT R H CSIC K FPTGQALGGHKR HYDGG                              R FDLN+P +PE               D+EV+SPL  KKPRL
Sbjct:   38 HVLQGWAKRKRSRRQRS---EEENLALCLLMLSRGGKQRVQAPQPESFAAPVPAE-------------------FKCSVCGKSFSSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDGATNRVHRCSICQKEFPTGQALGGHKRKHYDGGVGAAASSTELLAAAAAESEVGSTGNGSSAARAFDLNIPAVPEFVWRPCAKGKMMWEDDEEVQSPLAFKKPRL 258
The following BLAST results are available for this feature:
BLAST of CX043985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZFP1_WHEAT1.912e-2837.04Zinc finger protein 1 OS=Triticum aestivum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_14F10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14F10-L20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043985 ID=CX043985; Name=CX043985; organism=Citrus sinensis; type=EST; length=799bp
AAATGCTTATGTACACAAAAAAATCAGTCACTGACGCAAGTAACAGTAAA
GAAATACACGAAATAAATTTGCCTAAACTTAACATCCTTAAAAGTAGCCC
AAAAACAAAAAAAAAAAGTGGCAATTAAGTAAATTAAACTTCGATTTTGG
GGGGCAAGAAAAGACGGGGCTTCTTCGCCGGCAGTGGACTCTCCACCTCG
TCATCACCGGAGACGAAGAAAGCAGGGGAGAGCTCCGGTAAGACAGGGAG
GTTGAGGTCAAAGTCACGGTGGCTGACTTGGCTGTGAGTGCTACTGGATC
CGGATGACGTCACTCCGCTCTTCTCGCCGCCATCGTAGTGACAACGTTTG
TGTCCGCCCAAGGCTTGGCCAGTGGGGAAGGACTTGTGACAGATGGAACA
CTCGTGGGTCCTACCAGTGGCGTTCGGTACGCCGGTGGTCGTGGCGGTTG
CGTTGGTGTTGGTGGTAGTGGATGCGGAGTGTTCATCGCCGCCCCCAGAT
CCCTTACGGTGGCTGGCCTTGTGACCACCCAAGGCTTGGTAAGAAGAAAA
CGCCTTGTCGCACACGCTGCACTTGAAGAGAAGCTTCTGGTCAGAGGACG
ACGTCGTTGCAGCAGTAGATAGAGCAGGAGACTTCTGTCGCTGTGAGGCG
GCGGTGGTCGTGTTGCAGTTAGTTAAGACGGCGGTGGAGGTTGTGCCACG
TGCAAGCATGACGAGGCAGAGCGCGAGATACTCTTCTTCAGTTGGAGGAT
TGTGTGGACGCTTTGAGCGCTTGCGTTTGGTCCATGGCTCAAGGCAGTG
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