CX043977

Overview
NameCX043977
Unique NameCX043977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 8.631e-43
Identity = 89/167 (53.29%), Postives = 113/167 (67.66%), Query Frame = 1
Query:  358 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSK----HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            VS+ELD KTG +K+T++ YA  +  D    + YE++F+VPSGFG IGAI+V NE  +EM+L+DI L   DG  N  V  + CNSW+  K         KR+FF NK YLP QTP GL+ YR  +L   RG+G GER+  DR+YDYDVYNDLG+PD   +LARPVLGG
Sbjct:  119 VSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGG 285          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 82/163 (50.31%), Postives = 112/163 (68.71%), Query Frame = 1
Query:  358 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            +S ++DPKT   K +    ++D+++K  +  +  + Y +EF V S FG  GAI V N+H KE +L+ I ++G   GPV+  CNSW+ S+ D+  KR+ FTN+ YLPS+TP GL+  R +EL  LRGNG+GERK  DRIYDYDVYND+G+PD   ELARP LGG
Sbjct:  130 MSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAE-RVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELARPTLGG 291          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.055e-40
Identity = 87/167 (52.10%), Postives = 114/167 (68.26%), Query Frame = 1
Query:  358 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSKHDNKQ----KRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            VS+EL+ KTG  K+T+  YA K+  D  G + YE++F+VP+GFG IGA++V NE  +EM+L+D+ L   DG  N  V  + CNSW+  K    +    KR+FF  K YLP QTP GL+ YR E+L   RGNG G+R+  DR+YDYDVYNDLG+PD   +LARPVLGG
Sbjct:  137 VSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDRVYDYDVYNDLGNPDSNGDLARPVLGG 302          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.800e-40
Identity = 81/163 (49.69%), Postives = 112/163 (68.71%), Query Frame = 1
Query:  358 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            +S +LDPKT L K +    ++D+++K     +  + Y +EF V + FG  GAI V N+H KE +L+ I ++G   GPV+  CNSW+ S+ D+  KR+FFTN+ YLP++TP GL+  R +EL  LRG+G G RK  DRIYD+DVYNDLG+PDK  EL+RP LGG
Sbjct:  124 ISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAE-RVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDLGNPDKSSELSRPKLGG 285          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.070e-40
Identity = 81/160 (50.62%), Postives = 109/160 (68.12%), Query Frame = 1
Query:  358 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLG 831
            VS+ELDPKTG ++  ++ +A     +G     YE++  VP+ FG +GA+LVENEHH+EM++KDI L   G  +  +     SW+HSK D+ + R FFT K YLPSQTP G++  R +EL  LRG+G  ERK ++R+YDYD YNDLGDPDK  +  RPVLG
Sbjct:  106 VSSELDPKTGRERERVKGFAHMTLKEGT----YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFHERVYDYDTYNDLGDPDKNIDHKRPVLG 261          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.433e-39
Identity = 80/163 (49.08%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  358 VSAELDPKTGLDK----STIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            VS E DP+ G  K    S +  +  K     +  + Y +EF V +GFGE GA+ V N H +E Y++ IV++G P GP + TCNSW+     ++ +RVFF+N+ YLPS+TP GL+  R  EL  LRG+G GER+  DR+YDYDVYNDLG+PDK    ARPVLGG
Sbjct:  106 VSTETDPRKGTPKKSKPSALVGWFDKKDVKAE-RVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGG 267          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.789e-39
Identity = 78/162 (48.15%), Postives = 113/162 (69.75%), Query Frame = 1
Query:  358 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQ---GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            +SA+ D +      T++DYA+++ A+     +YE EFE+P  FG +GAI ++N++H++++LK + L  LP G +  TC SW+  K  +  KR+FF++K YLPSQTP+ LK+YR EEL  L+G  +   GE   ++RIYDYDVYND+GDPD  PELARPV+GG
Sbjct:  111 ISAKTDQRI-----TVEDYAQRVWAEAPDE-KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDNDPELARPVIGG 265          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 9.875e-39
Identity = 83/165 (50.30%), Postives = 112/165 (67.88%), Query Frame = 1
Query:  358 VSAELDPKTGLD----KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDG--LPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            +S ++ P+T       + +I+D+ +K GA GD ++ Y +EF V + FGE GAI V N H++E +L+ IV++G  LP GPV+  CNSW+ S  +   KRVFF+NK YLPS+TP GL+  R +EL  LRG+G G RK  DRIYDY  YNDLG+PDK  E  RP+LGG
Sbjct:  118 ISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGG 281          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.991e-36
Identity = 82/162 (50.62%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  358 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDP-DKKPELARPVLGG 834
            VS+ELDP+TG ++  I    +  G   D    YE+ F+VP+ FG IGA+ V N HH EM L DI +   G     V   C SW+   H    KRVFF    YLPSQTP G++  R  EL ILRG G GERK +DRIYDYDVYNDLG+P D      RPVLGG
Sbjct:  120 VSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRELEILRGTGCGERKEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGG 281          
BLAST of CX043977 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34
Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  436 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG 834
            G G   Y+  FE  S FG  GA  ++N    E YLK ++L+ +PN G ++  CNSW+++  + K  R+FF N  YLPS+TP  L +YR EEL  +RG+G GERK +DRIYDYDVYNDLG+PD   + ARPVLGG
Sbjct:   89 GAGEQAYDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGNPDSGDKYARPVLGG 222          
The following BLAST results are available for this feature:
BLAST of CX043977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC1_ORYSJ8.631e-4353.29Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX4_ARATH2.776e-4150.31Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOXC2_ORYSJ1.055e-4052.10Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX3_ARATH1.800e-4049.69Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX23_HORVU3.070e-4050.63Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX5_ORYSJ4.433e-3949.08Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX2_ARATH5.789e-3948.15Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ORYSJ9.875e-3950.30Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX21_HORVU5.991e-3650.62Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX4_SOYBN3.287e-3451.49Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14F05-L10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043977 ID=CX043977; Name=CX043977; organism=Citrus sinensis; type=EST; length=835bp
CTTCTAAAGCATCTTCTTCTTACTTGAAAAACAATGTTGAAGCCACAGGT
TCATCAACCTCAATCTATCAAACCCCTATTTCCATTATCCAAGCCGTTTC
TCCATGGAAATTACGGCCATGCCTTTCGTCCAGTTCAATCAACTTCTACA
CTTTTTAAAGGAAGTCCCAAACTTCGGATTGGTTCTGTTCCCAGAAACAC
TATCAAAGCTATAGCAACTTCCACTGAAAAATCAATCAAAGTTAAGGCTG
TTGTTACTGTGAAACCAACTGTGGGAGGCTTCCTCTCAAATATTTCTTTA
GACCAAGGGTTAGATGATCTTGGAGATTTGTTTGGTAAATCACTCCTCTT
GGAGCTTGTCAGTGCTGAGCTTGACCCCAAGACGGGATTGGATAAATCCA
CCATCCAAGATTATGCGCGCAAAATTGGTGCGGACGGGGATGGAAACATG
CAATATGAATCAGAATTCGAAGTCCCATCTGGATTTGGAGAAATTGGCGC
AATATTAGTGGAAAATGAGCACCACAAAGAGATGTATTTGAAAGATATTG
TTCTTGATGGTTTGCCAAATGGTCCTGTCAACGTAACATGTAATTCATGG
CTTCACTCAAAGCACGACAATAAACAAAAGAGAGTTTTCTTTACCAACAA
GTTGTACTTGCCATCACAAACACCAGACGGATTGAAGAGATATAGAGCTG
AGGAGCTTACCATTTTGCGAGGTAATGGACAAGGAGAGCGCAAAACCTAT
GATAGAATCTATGATTATGATGTCTACAATGATCTTGGAGATCCAGACAA
GAAACCTGAATTAGCAAGGCCTGTGCTTGGAGGCA
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