CX043969

Overview
NameCX043969
Unique NameCX043969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.396e-31
Identity = 78/238 (32.77%), Postives = 120/238 (50.42%), Query Frame = 2
Query:   50 ATSCFCLVFFLFIIRLFNKLWWIPNRTQAVMGSQGIRGPAYRLVYGNTKEILSLRNQIWISPMGLSHDILPRILPHICSWTKQYGMNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRHSEGK----EIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKLTNMSFLASRNAYKIKIP 751
            A + F LV   +  R+ +  W+ P R +  +  QG RG  YR + G+ KE   +  +    PM  ++DI+PR++PHI      YG N  TW G   ++ + +PELIKE+L++S            L K L  G+ +  G  W + R++ + AF  E L+ M+PA       ML +W     K    E+++   F +LTS++IS+ AFGS+Y EG  IF  L  +  L       + IP
Sbjct:   13 AATIFALVM-AWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSKPMEFNNDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAFAICYHDMLTKWEKIAEKQGSHEVDIFPTFDVLTSDVISKVAFGSTYEEGGKIFRLLKELMDLTIDCMRDVYIP 249          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  287 WTKQYGMNFLTW-YGSRAQLVITQPELIKEILSNSDGTYPKVQAP-GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRH--SEGKEIEVSQEFKLLTSEIISRTAF---GSSYLEGES-----IFNKLTNMSFLASRNAY 736
            W +++      W +GSRA L+I  P+ +K IL  SD   PK Q    FL   +G GL+   G+ W + R++ T AF+ + L+  +  M  SV+IML +W    S+   +EV Q+  L+T + I + AF   GS  L+  S         L N+ F   RN +
Sbjct:   78 WVEKFPSACPRWLWGSRAHLLIYDPDYMKVILGRSD---PKAQGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVQIMLDKWEQLVSQDSSLEVFQDISLMTLDTIMKCAFSHQGSVQLDRNSQSYIQAVGDLNNLFFSRVRNVF 236          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  269 LPHICSWTKQYGMNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRH--SEGKEIEVSQEFKLLTSEIISRTAF---GSSYLEGES-----IFNKLTNMSFLASRNAY 736
            L  I  W +++      W  G++A+L++  P+ +K IL  SD   P+      +   +G GL+   G+ W + R++ T AF+ + L+  +  MV SV+IML RW    S+   +E+ Q   L+T + I + AF   GS  L+  S       N L N+ F  +RN +
Sbjct:   72 LERIQKWVEKFPGACPWWLSGNKARLLVYDPDYLKVILGRSDPKAPRNYK--LMTPWIGYGLLLLDGQTWFQHRRMLTPAFHYDILKPYVGLMVDSVQIMLDRWEQLISQDSSLEIFQHVSLMTLDTIMKCAFSYQGSVQLDRNSHSYIQAINDLNNLVFYRARNVF 236          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 54/202 (26.73%), Postives = 84/202 (41.58%), Query Frame = 2
Query:   65 CLVFFLFIIRLFNKLWWIPNRTQAVMGSQGIRGPAYRLVYGNTKEILSLRNQIWISPMGLSHDILPRILPHICSW-TKQYGMNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSS 667
            CLV  L  I       W+  R +    +  + GP    + GN      L                P  +PH+ +   K+Y   F    GS   L++ QP  I+ +L +S     K     FLR  L DGL+ +GG  WHR+RK+ T AF+   L            +++ +W+ + G   ++  +  L T ++I  TA G S
Sbjct:   13 CLVVALARISWLPLRSWLRRRRRTHQLAAQLPGPRNLPLLGNFHMFFGLE---------------PWQVPHLINQLAKKYDGTFKLKMGSNFSLMMFQPRDIEVVLGSSQ-LLDKAVEYSFLRGWLNDGLLLSGGRKWHRRRKIITPAFHFRILESYDEIFDRQTRLLIHKWQQTLGHSFDLGHDVHLFTLDVICETAMGVS 198          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 2
Query:  248 HDILPRILPHICSWTKQYGMNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAP-GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRHSEGKE--IEVSQEFKLLTSEIISRTAF---GSSYLEGES-----IFNKLTNMSFLASRNAY 736
            HD+  R    + +W +++    L W  GS+ ++++  P+ +K +L  SD   PK      FL   +G GL+   G+ W + R++ T AF+   L+  +  M  SV IML +W   + ++  +E+     L+T + + + AF   GS  L+  S         L N++F   R+A+
Sbjct:   62 HDLKDREFQQVLTWVEKFPGACLQWLSGSKTRVLLYDPDYVKVVLGRSD---PKASGIYQFLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYGILKPYVKIMADSVNIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLTFFRVRSAF 233          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 2
Query:  278 ICSWTKQ----YGMNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWR-HSEGKEIEVSQEFKLLTSEIISRTAFG 661
            I +W K+    +G  F  W+G    ++ T PE IK++L N+     K +    L   LG GL+T GGE+WHR+RKL T  F+   L +    M  +  I+++R R  + G+  ++     L   + I  TA G
Sbjct:   52 ILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQ-LLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMG 183          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 49/169 (28.99%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  269 LPHICSWTKQYGMNFLTWYG-SRAQLVITQPELIKEILSNSDGTYPKVQAP-GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRH--SEGKEIEVSQEFKLLTSEIISRTAF---GSSYLEGES------IFNKLTNMSFLASRNAY 736
            L  I  W +++      W G ++ ++ +  P+ +K IL  SD   PK +    F+   +G GL+   G+ W + R++ T AF+ + L+  +  MV SV+IML +W    S+   +EV Q+  L+T + I + AF   GS  L+  +          L N+ F   RN +
Sbjct:   72 LQQILKWVEKFPRACPHWIGGNKVRVQLYDPDYMKVILGRSD---PKSRGSYTFVAPWIGYGLLLLNGQPWFQHRRMLTPAFHYDILKPYVGLMVDSVQIMLDKWEQLVSQDSSLEVFQDISLMTLDTIMKCAFSYQGSVQLDSRNSQSYIQAVGDLNNLVFARVRNIF 237          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4AE_MOUSE (Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 49/175 (28.00%), Postives = 86/175 (49.14%), Query Frame = 2
Query:  248 HDILPRILPHICSWTKQYGMNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAP-GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRHSEGKE--IEVSQEFKLLTSEIISRTAF---GSSYL-EGESIFNK----LTNMSFLASRNAY 736
            H +  + L  I  W +++    L    GS  ++++  P+ +K +L  SD   PK      F    +G GL+   G+ W + R++ T AF+ + L+  +  M  SV IML +W   +G++  +E+     L+T + + + AF   GS  L E   ++ K    L N++F   RNA+
Sbjct:   62 HHLKDKELQQILIWVEKFPSACLQCLSGSNIRVLLYDPDYVKVVLGRSD---PKASGIYQFFAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVNIMLDKWEKLDGQDHPLEIFHCVSLMTLDTVMKCAFSYQGSVQLDENSKLYTKAVEDLNNLTFFRLRNAF 233          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 2
Query:  269 LPHICSWTKQYGMNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI---LGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRHSEGKE--IEVSQEFKLLTSEIISRTAF---GSSYLEG 679
            L  I +  + +   F  W+ GS+A L++  P+ +K IL  SD   PK  A G  R +   +G GL+   G+ W + R++ T AF+ + L+  +  M  S+ +ML +W    G++  IE+ Q   L+T + + + AF   GS  ++G
Sbjct:   71 LQQIMTCVENFPSAFPRWFWGSKAYLIVYDPDYMKVILGRSD---PK--ANGVYRLLAPWIGYGLLLLNGQPWFQHRRMLTPAFHYDILKPYVKNMADSIRLMLDKWEQLAGQDSSIEIFQHISLMTLDTVMKCAFSHNGSVQVDG 211          
BLAST of CX043969 vs. ExPASy Swiss-Prot
Match: CP4A2_RAT (Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 46/174 (26.44%), Postives = 85/174 (48.85%), Query Frame = 2
Query:  248 HDILPRILPHICSWTKQYGMNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRDMIPAMVASVEIMLKRWRHSEGKE--IEVSQEFKLLTSEIISRTAF---GSSYLEGES-----IFNKLTNMSFLASRNAY 736
            H++  R    + +W +++    L W  GS A++++  P+ +K +L  SD    +  AP      +G GL+   G+ W + R++ T AF+ + L+  +  M  SV IML +W   + ++  +E+     L+T + + + AF   GS  L+  S         L N+ F   R+A+
Sbjct:   62 HNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPW-----IGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAF 230          
The following BLAST results are available for this feature:
BLAST of CX043969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
C72A1_CATRO6.396e-3132.77Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP4A6_RABIT9.279e-1433.33Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP4A4_RABIT2.700e-1330.54Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
C4D10_DROMT5.092e-1226.73Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]
CP4AE_RAT8.685e-1227.43Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4S3_DROME1.935e-1132.33Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP4A5_RABIT5.630e-1128.99Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]
CP4AE_MOUSE7.352e-1128.00Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE... [more]
CP4AA_RAT7.352e-1130.82Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4A2_RAT7.352e-1126.44Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E11-J22-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043969 ID=CX043969; Name=CX043969; organism=Citrus sinensis; type=EST; length=754bp
CTTTGCAAAGATTGTTGCAGCGATGGGATCACCGATAATACTGTATGCTG
CTACAAGTTGTTTCTGTTTAGTGTTCTTCTTATTTATTATCAGATTATTC
AACAAACTATGGTGGATTCCAAATCGAACGCAAGCTGTGATGGGTTCACA
AGGAATCAGAGGTCCTGCTTACAGACTGGTTTATGGAAACACCAAAGAGA
TCCTCAGCCTGAGAAACCAAATCTGGATCAGCCCCATGGGATTATCACAT
GACATACTTCCCAGGATTCTTCCGCACATTTGTTCATGGACTAAACAATA
TGGGATGAACTTCTTGACTTGGTATGGTTCACGAGCTCAATTGGTGATCA
CACAACCTGAGCTGATTAAAGAAATTCTGAGCAATAGCGATGGAACATAT
CCGAAAGTACAGGCCCCAGGATTCTTGAGGAAGATCTTAGGTGATGGTCT
TGTAACAGCAGGAGGTGAAAATTGGCATAGACAACGAAAACTTGCCACCC
TCGCTTTCTATGCAGAAAGCTTAAGAGATATGATCCCAGCGATGGTTGCA
AGTGTGGAGATTATGTTAAAAAGATGGAGACACAGCGAGGGCAAGGAGAT
CGAGGTATCCCAAGAATTTAAGCTTTTAACATCAGAAATTATTTCCAGAA
CAGCTTTTGGAAGTAGTTATTTGGAAGGGGAAAGCATATTCAATAAGCTT
ACCAATATGTCTTTCCTCGCCTCCAGAAATGCCTATAAGATTAAAATTCC
TCTT
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