CX043953

Overview
NameCX043953
Unique NameCX043953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.280e-48
Identity = 95/205 (46.34%), Postives = 136/205 (66.34%), Query Frame = 3
Query:   90 YDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNLE--EIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSR--TANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHFTRDWM 692
            YD+  E++AFDDTKAGVKGLVD+GI  +P+IF+ PP++  ++  +H   F  PVIDL G+  + ++  EIVD+VR A+E WGFFQVVNHGIP +VL+  ++G  +F E D E+KK++YTRD  + V + SN DL+ S    A+WRDT+    +A       E+P  C ++  ++ K+V KL  TL ELLS  LGL    + +D+M
Sbjct:   10 YDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPPKDRAKKCETH---FVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTI-FCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLD-RSYLKDYM 209          

HSP 2 Score: 36.965 bits (84), Expect = 6.280e-48
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 1
Query:  715 CQYYPPCPQPDLTLG 759
            C YYPPCPQP+LT+G
Sbjct:  218 CNYYPPCPQPELTMG 232          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 8.879e-47
Identity = 92/211 (43.60%), Postives = 128/211 (60.66%), Query Frame = 3
Query:   69 TTQTVTDYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIF------IRPPEELVEELTSHQTNFQVPVIDLDGVRGNNL---EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEH 674
            +T+    +DRA E++AFD+TK GVKGLVD+GI  IPRIF      +  P+ L  +L   +T   +P IDL G    +    +  ++ ++ AA  WGFFQV+NHG+ L +LE+M +G+  F+E   E++K+ Y+RD  R   + SNFDL+ +  ANWRDT     +A    +P + PE+CRD   EY K V  L E LFELLS ALGL   H
Sbjct:    3 STKIAPSFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKT---IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTF-YCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNH 209          

HSP 2 Score: 43.1282 bits (100), Expect = 8.879e-47
Identity = 18/37 (48.65%), Postives = 24/37 (64.86%), Query Frame = 1
Query:  655 LG*RLNILLEIGCPKEYILLCQYYPPCPQPDLTLGAT 765
            LG   N L ++ C K   +LC Y+PPCP+PDLT G +
Sbjct:  203 LGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTS 239          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.603e-45
Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 3
Query:   81 VTDYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEH 674
            V   DR+  ++AFD+TK GVKGL+DAGI  IP IF  PP  L        ++F +P IDL G   +++    +V+++  AAE WGFFQV+NHGIP++VLE+MI+GI +F+E D E+KK FY+RD    + ++SNFDL  S  ANWRDTL   T A     P + P  C +   EY K V KL + LFELLS ALGL   H
Sbjct:    8 VAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYT-APDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNH 206          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.022e-44
Identity = 93/198 (46.97%), Postives = 132/198 (66.67%), Query Frame = 3
Query:   87 DYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEH 674
            +YDRA E++AFD+ K GVKGLVDAG+  +PRIF  P   +     +  T   +P IDL GV  + +  E +V +V+ A E +GFFQ +NHG+PL+V+E+MI GI +F++ D E++K FYTRD+T+ ++++SN DL+ S  A+WRDTL+   +A       + PEVC +   EY K V KLAE +FE+LS ALGL   H
Sbjct:    4 NYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPT-STVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLS-CVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNH 199          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.959e-43
Identity = 95/207 (45.89%), Postives = 131/207 (63.29%), Query Frame = 3
Query:   90 YDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRP------PEELVEELTSHQTNFQVPVIDL------DGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEH 674
            +DRA E++AFD+TK GVKGLVD+G+  +PRIF  P      P+ L  +L   +T   +P IDL      D ++ NN    +++++ AA  WGFFQV+NHG+ L +LE+M +G+  F+E   E++KEFY+RD +R   + SNFDL  S  ANWRDT +  T+A     P + PE+CRD   EY K V  L + LFELLS ALGL+  H
Sbjct:   10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKT---IPTIDLGGRDFQDAIKRNNA---IEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS-CTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNH 209          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 89/203 (43.84%), Postives = 139/203 (68.47%), Query Frame = 3
Query:   78 TVTDYDRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVE-ELTSHQTNFQVPVIDLDGVRGNN--LEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQ-TRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEH 674
            T+++ +  +E++AFD+TKAGVKG+VD GI  IPRIFI  P+ L    +   +++ ++PVI+L+G+  N+    EIV+++  A+E +GFFQ+VNHGIP +V+++M++G+ KF+E D ++K+++Y+RD+  +N  ++SN+ L      NWRDT+    + S   DP E+P+VCRD   +Y   V  L   LFELLS ALGLK  H
Sbjct:   35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRISVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTME-CIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNH 236          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.336e-18
Identity = 55/197 (27.92%), Postives = 98/197 (49.75%), Query Frame = 3
Query:  138 VKGLVDAGIVNIPRIFIRPPEEL-------VEELTSHQTNFQVPVIDLDGVRGNN---LEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVR-FNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRD---AAREYIKNVTKLAETLFELLSLALGLKAEHFTRD 686
            V+ L  +GI++IP+ +IRP EEL       +EE    +   QVP IDL  +  ++    E  +++++ A+  WG   ++NHGIP +++E + +   +F  L VE K+++     T  ++ + S    + S    W D            D + +P+   D   A  EY K +  LA  +F+ LS+ LGL+ +   ++
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEE--KKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKE 201          

HSP 2 Score: 30.8018 bits (68), Expect = 5.336e-18
Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  682 EIGCPKEYILLCQ--YYPPCPQPDLTLG 759
            E+G  +E +L  +  YYP CPQP+L LG
Sbjct:  201 EVGGLEELLLQMKINYYPKCPQPELALG 228          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.102e-16
Identity = 57/194 (29.38%), Postives = 93/194 (47.94%), Query Frame = 3
Query:  120 DDTKAGVKGLVDAGIVNIPRIFIRPPEELVE-----ELTSHQTNFQVPVIDLDGVRGNNLE---EIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQT--RNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRD---AAREYIKNVTKLAETLFELLSLALGL 662
            D   + V+ L  +GI  IP+ +IRP +ELV      E   +    QVP IDL  +  +N +   +  ++++ AA  WG   +VNHGI   +++++ +    F +L +E +KE Y  DQ   +   + S    + S    W D            D + +P+   D   A  EY K + +LA  + ++LSL LGL
Sbjct:    5 DSVNSRVETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIE-QKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGL 197          

HSP 2 Score: 30.8018 bits (68), Expect = 2.102e-16
Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  682 EIGCPKEYILLCQ--YYPPCPQPDLTLG 759
            E+G  +E +L  +  YYP CPQP+L LG
Sbjct:  205 EVGGLEELLLQMKINYYPKCPQPELALG 232          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.556e-16
Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = 3
Query:  171 IPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVR-FNSNFDLHYSRTANWRDTL----TISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLK 665
            IP  +IR   E     T      QVPVIDL G   N  E +V+ +  A+  WG FQVVNHGIP + + ++ +   +F EL  + K+     +  + V  + +           W D L       +  + N  PN  P + R+A  EY   +  + + LFE LSL +GL+
Sbjct:   19 IPSEYIRSESEQPAVTTMQGVVLQVPVIDL-GSSNNTEENLVELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNN-PPLYREANEEYAVALRGVVDKLFEALSLGIGLE 186          

HSP 2 Score: 35.8094 bits (81), Expect = 3.556e-16
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  703 YILLCQYYPPCPQPDLTLG 759
            Y+L   YYPPCP+PDL LG
Sbjct:  201 YMLKINYYPPCPRPDLALG 219          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.623e-16
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 3
Query:  162 IVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVR-FNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPE---VCRDAAREYIKNVTKLAETLFELLSLALGLKAEHF 677
            I  IP  +IR   E     T H    +VPVIDL     ++ ++IV  V  A++ WG FQVVNHGIP  V+ ++ E    F EL  E K+     + ++++  + +           W D L       + ++   +P+     R+A  EY K +  + + LF+ LSL L L+   F
Sbjct:   16 IDTIPAEYIRSENEQPVISTVHGVVLEVPVIDLSD---SDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSF 188          

HSP 2 Score: 35.4242 bits (80), Expect = 4.623e-16
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  703 YILLCQYYPPCPQPDLTLG 759
            Y++   YYPPCP+PDL LG
Sbjct:  199 YLMKINYYPPCPRPDLALG 217          
The following BLAST results are available for this feature:
BLAST of CX043953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ACCH3_SOLLC6.280e-4846.341-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH8.879e-4743.601-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH1_ARATH1.603e-4548.501-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH3.022e-4446.97Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCH3_ARATH1.959e-4345.891-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO5.700e-4343.84Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
LDOX_ARATH5.336e-1827.92Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_MALDO2.102e-1629.38Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_PETCR3.556e-1631.18Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS_EUSGR4.623e-1630.11Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E03-J6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043953 ID=CX043953; Name=CX043953; organism=Citrus sinensis; type=EST; length=766bp
GTGCAATGGTGTGATCTCTATCAAGCAATAAAAAACAGACGATGGATATC
TCAGATGCCAGTAGAACGACCACGCAAACTGTAACGGACTACGACAGAGC
TAAAGAGGTTCAGGCTTTTGATGATACAAAAGCCGGTGTCAAAGGATTAG
TGGATGCTGGAATTGTGAACATTCCGAGGATATTCATTCGACCACCTGAG
GAGCTTGTCGAGGAGTTGACCAGTCATCAGACCAATTTTCAAGTACCGGT
TATCGATCTTGATGGCGTCAGAGGCAATAACCTTGAGGAGATTGTTGATC
AAGTTCGGGCTGCAGCAGAGACATGGGGCTTCTTTCAAGTGGTGAATCAC
GGTATTCCCTTAAATGTGTTGGAAGAGATGATTGAAGGGATAAGCAAGTT
TAATGAACTAGATGTTGAGTTGAAGAAAGAGTTTTATACACGTGACCAGA
CAAGAAATGTCAGATTCAACAGCAACTTTGATCTGCATTACTCACGAACA
GCTAATTGGCGGGACACGTTGACAATTTCTACCTTAGCTTCCACCAATTT
AGACCCCAACGAATACCCAGAAGTTTGCAGAGATGCTGCGAGAGAGTACA
TTAAAAATGTCACAAAATTGGCTGAAACTCTGTTTGAATTATTATCACTG
GCTCTTGGGCTGAAGGCTGAACATTTTACTAGAGATTGGATGCCCTAAAG
AATACATCCTTCTCTGCCAATACTATCCACCTTGCCCTCAGCCAGATTTG
ACATTGGGAGCTACCG
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