CX043952

Overview
NameCX043952
Unique NameCX043952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.432e-63
Identity = 127/226 (56.19%), Postives = 146/226 (64.60%), Query Frame = -3
Query:  131 NFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRFSTVLDDNSPLHQLKL 808
            NFDL  S  ANWRDTL   T A     P + P  C +   EY K V KL + LFELLS ALGL   HL ++ C    +LL  YYPPCPQPDLTLG T HSD SFLTILLQD IGGLQV HD  WV V P+ G LVVN+GD LQ+I+NDKF SV+HRV+A+  GPR+SV CFF  +    P+ YGPIKE+ S ENPP YRD   +EY     S   D  S L  LK+
Sbjct:  141 NFDLFSSPAANWRDTLGCYT-APDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 5.261e-58
Identity = 117/230 (50.87%), Postives = 147/230 (63.91%), Query Frame = -3
Query:  131 NFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFF----MGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRFSTVLDDNSPLHQLKL 808
            N+ L      NWRDT+    + S   DP E+P+VCRD   +Y   V  L   LFELLS ALGLK  HL E+ C +  ILL  YYP CPQP+LT G + HSD  FLTIL+QDQIGGLQ+  +NQW+ V  I G LV+NI D LQ+I+NDKFKSV+HRV+A+ VGPR+SV   F           P+ YGPIKEL S ENPPIY++    ++ + RF+   DD+S L   +L
Sbjct:  171 NYVLIPGIACNWRDTMEC-IMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.431e-56
Identity = 114/227 (50.22%), Postives = 144/227 (63.44%), Query Frame = -3
Query:  131 NFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASH-VGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRFSTVLDDNSPLHQLKL 808
            NFDL  S  ANWRDT +  T+A     P + PE+CRD   EY K V  L + LFELLS ALGL+  HL ++ C K  ++L  YYPPCP+PDLTLG + HSD SFLT+LL DQI GLQV  +  W  V  + G L++NIGD LQ+I+NDKF S++HRV+A+     RVSV CFF       P+ YGPI+EL S ENPP YR+    +Y +   +  LD  S L   K+
Sbjct:  144 NFDLFSSPAANWRDTFSC-TMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.286e-55
Identity = 109/207 (52.66%), Postives = 134/207 (64.73%), Query Frame = -3
Query:  191 NFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASH-VGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 808
            NFDL+ +  ANWRDT     +A    +P + PE+CRD   EY K V  L E LFELLS ALGL   HL ++ C K   +LC Y+PPCP+PDLT G + HSD SFLT+LL D I GLQV  +  W  V  + G L++NIGD LQ+I+NDKF S+KHRV+A+     RVSV CFF  H    P+ YGPIKEL S ENPP YR+    +Y
Sbjct:  144 NFDLYTAAAANWRDTF-YCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDY 349          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.273e-50
Identity = 111/229 (48.47%), Postives = 142/229 (62.01%), Query Frame = -3
Query:  131 NFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVAS-HVGPRVSVPCFFMGHNAEIPKS--YGPIKELTSAENPPIYRDFRASEYFSKRFSTVLDDNSPLHQLKL 808
            N DL+ S  A+WRDTL+   +A       + PEVC +   EY K V KLAE +FE+LS ALGL   HL E+ C K   +LC  +PPCP+P+ T G   H+D SFLTILL D  GGLQV +D  W+ V P    L+ N+GDFLQ+ISNDKF S++HR++A+    PR+SV CFF+ H    P S  YGPIKEL S  NPP YRD   SE  +   +   + NS L  L++
Sbjct:  134 NADLYESPAASWRDTLSC-VMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFV-HTFTSPSSRVYGPIKELLSELNPPKYRD-TTSESSNHYVARKPNGNSSLDHLRI 359          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.464e-49
Identity = 104/228 (45.61%), Postives = 138/228 (60.53%), Query Frame = -3
Query:  131 NFDLHYSRT--ANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRFSTVLDDNSPLHQLKL 808
            N DL+ S    A+WRDT+    +A       E+P  C ++  ++ K+V KL  TL ELLS  LGL   +L +          C YYPPCPQP+LT+G   H+D  F+TILLQD +GGLQV H N WV V P  G LVVNIGDFLQ++SNDK+ SV+HR ++++VG R+S+ CFF     +  K YGPI EL S +NPP YR     ++ S   +  LD  S L + K+
Sbjct:  137 NLDLYKSSVPAASWRDTI-FCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.482e-31
Identity = 72/179 (40.22%), Postives = 106/179 (59.22%), Query Frame = -3
Query:  191 PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE--YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSY--GPIKELTSAENPPIYRDFRASEY 715
            P   R+A  EY K + ++ + +F+ LSL LGL+   ++E     E  Y+L   YYPPCP+PDL LG   H+D S++TIL+ +++ GLQVF D  W  V+ I   L+V+IGD ++I+SN K+KSV HR   +    R+S P F      E P  +  GPI +L S  NPP ++  +  +Y
Sbjct:  165 PPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFL-----EPPSEHEVGPIPKLLSEANPPKFKTKKYKDY 338          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.303e-29
Identity = 72/187 (38.50%), Postives = 107/187 (57.22%), Query Frame = -3
Query:  173 PNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI--GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRFS 727
            P   PE  R+   EY  +V KL+ETL  +LS  LGLK + L E   G   EY++   YYPPCP+PDL LG   H+D S +T+L+ +++ GLQVF D+ W   + I   ++V+IGD +  +SN ++K+V HR        R+S P F      +I    GP+ ELT  +NPP ++ F   +Y  ++ +
Sbjct:  149 PKNPPEY-REVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKI---VGPLPELTGDDNPPKFKPFAFKDYSYRKLN 331          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.131e-29
Identity = 69/177 (38.98%), Postives = 101/177 (57.06%), Query Frame = -3
Query:  191 PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI--GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 715
            P   R    EY K + ++ + LF  LSL LG++   L E   G   EY+L   YYPPCP+PDL LG   H+D S LT+L+ +++ GLQVF D++W+  + I   LV++IGD ++I+SN K+K+V HR   +    R+S P F            GP+ +L   ENPP Y+  +  +Y
Sbjct:  152 PPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFL---EPPADTVVGPLPQLVDDENPPKYKAKKFKDY 325          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.752e-29
Identity = 72/179 (40.22%), Postives = 102/179 (56.98%), Query Frame = -3
Query:  191 PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI--GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSY--GPIKELTSAENPPIYRDFRASEY 715
            P   R+A  EY K++  + E LF LLSL LGL+ + L +   G   EY+L   YYPPCP+PDL LG   H+D S +TIL+ + + GLQ   D +W  V+ I   LV++IGD ++I+SN K+ SV HR   +    R+S P F      E P  +  GP  +L +A N P Y+  +  +Y
Sbjct:  154 PPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFL-----EPPADHVVGPHPQLVNAVNQPKYKTKKYGDY 327          
The following BLAST results are available for this feature:
BLAST of CX043952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCH1_ARATH5.432e-6356.191-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO5.261e-5850.87Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_ARATH6.431e-5650.221-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH9.286e-5552.661-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH5.273e-5048.47Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCH3_SOLLC4.464e-4945.611-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_PETHY5.482e-3140.22Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS1_ARATH2.303e-2938.50Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_CITUN5.131e-2938.98Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS_MALDO8.752e-2940.22Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E03-J6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043952 ID=CX043952; Name=CX043952; organism=Citrus sinensis; type=EST; length=810bp
TTTTTTTTTTTTTTTTTAGTTAAAACATATTTTTTTCGGAATTATTGGGA
AAGAGTTCACAACAGGACTCCGCAATTTGTAAATTGTTGTTACCAAATAC
GAGTAATTTATACAAATATTGCCAGCTTCATAGTTTGAGCTGATGGAGGG
GAGAATTGTCATCAAGCACCGTAGAAAATCGTTTGCTAAAATATTCACTT
GCACGAAAATCTCTGTAAATAGGAGGATTTTCTGCGGATGTCAACTCTTT
GATCGGCCCATAAGACTTTGGGATTTCTGCATTATGTCCCATGAAAAAGC
ATGGCACGGAAACCCTTGGACCGACATGACTGGCGACTACTCTGTGTTTA
ACACTCTTGAACTTGTCGTTTGATATAATCTGGAGGAAGTCCCCTATGTT
TACCACTAAGCCTCCCACAATGGGTTGAACACCAACCCATTGATTGTCAT
GAAAGACTTGAAGGCCGCCGATTTGGTCTTGCAGAAGAATGGTAAGAAAT
GAAGGGTCTGAATGCCCGGTAGCTCCCAATGTCAAATCTGGCTGAGGGCA
AGGTGGATAGTATTGGCAGAGAAGGATGTATTCTTTAGGGCATCCAATCT
CTAGTAAATGTTCAGCCTTCAGCCCAAGAGCCAGTGATAATAATTCAAAC
AGAGTTTCAGCCAATTTTGTGACATTTTTAATGTACTCTCTCGCAGCATC
TCTGCAAACTTCTGGGTATTCGTTGGGGTCTAAATTGGTGGAAGCTAAGG
TAGAAATTGTCAACGTGTCCCGCCAATTAGCTGTTCGTGAGTAATGCAGA
TCAAAGTTGC
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