CX043948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.103e-62 Identity = 116/206 (56.31%), Postives = 152/206 (73.79%), Query Frame = -3 Query: 272 LARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEGCLTLGWHSRPLIAASAW 880 LA ++++ F +RG A+ L D+ ML++ P E ++AVNS+ +LHKLLG R ++ VLG + + P+I TVVEQESNHN P FLDRFT +L+YYST+FDSLE P +K ++E+YL ++ICNVV C+G RVERHE L++WRNR AGF H+GSNAF+QASMLL LF+ EGY VEE++GCL LGWH+RPLIA SAW Sbjct: 327 LAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLG----RPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDKVMSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAW 528
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.292e-62 Identity = 116/207 (56.04%), Postives = 150/207 (72.46%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEGCLTLGWHSRPLIAASAW 883 +LA ++++ F +RG A+ L D+ ML++ P E A+AVNS+ +LHKLLG R +E VLG ++ + P I TVVEQES+HN P FLDRFT +L+YYST+FDSLE P +K ++E+YL ++ICN+V CEG RVERHE L++W NR +GF P HLGSNAF+QASMLL LF+ EGY VEE GCL LGWH+RPLI SAW Sbjct: 371 QLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVFELHKLLG----RTGGIEKVLGVVKQIKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEGVPSSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWANRFGSSGFAPAHLGSNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAW 573
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.627e-61 Identity = 115/207 (55.56%), Postives = 151/207 (72.95%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPK--EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLF-SAEGYSVEETEGCLTLGWHSRPLIAASAW 883 +LA ++++ F +RG A+ L D+ ML++ P EA+AVNS+ +LHKLLG R +E VLG ++ + P I TVVEQESNHN P FLDRFT +L+YYST+FDSLE P +K ++E+YL ++ICN+V CEG RVERHE L++W NR +G P HLGSNAF+QASMLL++F S +GY VEE+ GCL LGWH+RPLI SAW Sbjct: 378 QLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLG----RPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.430e-61 Identity = 115/207 (55.56%), Postives = 151/207 (72.95%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLF-SAEGYSVEETEGCLTLGWHSRPLIAASAW 883 +L ++N+ F +RG A+ L D+ ML++ P E ++ VNS+ +LHKLL AR +E V+ ++ + P+IMTVVEQE+NHN P F+DRFT +L+YYST+FDSLE+ P +K ++E+YL ++ICNVV CEGS RVE HE L +WR RL +GF P+HLGSNAF+QASMLL LF S EGY VEE G LTLGWH+RPLI SAW Sbjct: 374 KLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLL----ARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNNQDKMMSEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAW 576
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.851e-61 Identity = 115/209 (55.02%), Postives = 154/209 (73.68%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQP----EKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEGCLTLGWHSRPLIAASAW 883 +LA ++++ F +RG A+ L D+ ML++ E++AVNS+ +LH LL AR +E VL ++++ P I+T+VEQE+NHN P FLDRFT +L+YYST+FDSLE C + P +K ++E+YL ++ICNVV CEG RVERHE LA+WR RL AGF P++LGSNAF+QASMLL LF+ +GY VEE GCL LGWH+RPLIA SAW Sbjct: 370 QLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVFELHSLL----ARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAW 574
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.642e-61 Identity = 114/207 (55.07%), Postives = 147/207 (71.01%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEGCLTLGWHSRPLIAASAW 883 +LA ++++ F +RG A+ L D+ ML++ P E A+AVNS+ +LHKLLG R +E V G ++ + P I TVVEQESNHN P FLDRFT +L+YYST+FDSLE P +K ++E+YL ++ICN+V CEG RVERHE L++W NR +GF P HLGSNAF+QAS LL LF+ EGY VEE GCL L WH+RPLI SAW Sbjct: 365 QLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVFELHKLLG----RTGGIEKVFGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGAPSSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWSNRFGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAW 567
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.953e-60 Identity = 114/217 (52.53%), Postives = 158/217 (72.81%), Query Frame = -3 Query: 242 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLF-SAEGYSVEETEGCLTLGWHSRPLIAASAWHAVPDVMMSH 883 + A ++++ F +RG A+ L D+ ML++ P E ++ VNS+ +LH+LL AR +E VL ++ + P+I+TVVEQE+NHN P F++RFT +L+YYST+FDSLE P +K ++E+YL ++ICNVV CEG+ RVERHE L +WR RL+ AGF P+HLGSNAF+QAS+LL LF S EGY VEE EG L LGWH+RPLIA SAW + +++H Sbjct: 367 KFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQLL----ARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECSPNSQDKMMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWKPGNNPVVAH 579
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.477e-59 Identity = 119/215 (55.35%), Postives = 151/215 (70.23%), Query Frame = -3 Query: 269 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEA---CPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLF-SAEGYSVEETEGCLTLGWHSRPLIA----ASAWH 883 +LA + I F FRG A+ L D++P ML + P E +AVN++ +LH LL AR +E V+ I+ + PKI+TVVEQE+NHN P FLDRFT AL+YYST+FDSLE P + A++E+YL R+ICNVV CEG RVERHEPL +WR R+ AG P+HLGSNA++QASMLL LF S +GY VEE GCL LGWH+RPLIA A+ W+ Sbjct: 327 QLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVVAVNAVFELHPLL----ARPGGIEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTRMETAGVSPVHLGSNAYKQASMLLALFASGDGYRVEENNGCLMLGWHTRPLIAHLGLATRWY 537
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 7.153e-59 Identity = 117/226 (51.77%), Postives = 155/226 (68.58%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPK-------EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEA-----CPLQP---------EKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEGCLTLGWHSRPLIAASAW 883 + A ++ + F +RG+ A+ L D++P+MLQ + E +AVNS+ +LH+LL A+ +E VLG + + P+I+TVVEQE+NHN FLDRFT +L+YYSTMFDSLE L P ++ ++E+YL R+ICNVV CEG+ R ERHE L +WRNRL AGF P+HLGSNA++QAS LL LF+ +GY VEE EGCLTLGWH+RPLIA SAW Sbjct: 399 QFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEADANEEPEVIAVNSVFELHRLL----AQPGALEKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAW 620
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.342e-59 Identity = 118/228 (51.75%), Postives = 156/228 (68.42%), Query Frame = -3 Query: 257 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKE--ALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC------------PLQP----EKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETEGCLTLGWHSRPLIAASAWHAVPD 883 +LA ++ + F FRG A+ L D+ +L + P E A+A+NS+ +LH+LL +R +E VL I+ +NPKI+T+VEQE+NHN F+DRF AL+YYSTMFDSLE+ P P + ++E+YL R+ICNVV CEGS RVERHE L +WR R+ +GF P+HLGSNAF+QASMLL LF+ +GY VEE +GCL LGWH+RPLIA SAW +PD Sbjct: 355 QLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLL----SRPGAIEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWKLLPD 578 The following BLAST results are available for this feature:
BLAST of CX043948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043948 ID=CX043948; Name=CX043948; organism=Citrus sinensis; type=EST; length=885bpback to top |