CX043946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.612e-55 Identity = 93/139 (66.91%), Postives = 121/139 (87.05%), Query Frame = -2 Query: 422 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 835 F+++IVNGS+NAPFF++RF+EA++H+S+LFDMFD+T+PR++ ER+ FERE YGREAMNVIACE +RVERPETY+QWQ R +RAGFKQ + EL+E GKLK W YHKDFV+D+++ W+LQGWKGR ++ASSCWVPA Sbjct: 492 FIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKGRTLYASSCWVPA 630
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 8.000e-55 Identity = 94/139 (67.63%), Postives = 118/139 (84.89%), Query Frame = -2 Query: 422 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 835 F++S VNGS+NAPFF TRF+EA+FH+S+LFD+F T+ +E+PER+ FE E YGRE MNVIACEG++RVERPETYKQWQ R IRAGFKQ P+ EL++ K+K W YHKDFV+D+D+NW LQGWKGRI+F+SSCWVP+ Sbjct: 524 FLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVPS 662
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.690e-53 Identity = 92/138 (66.67%), Postives = 116/138 (84.06%), Query Frame = -2 Query: 425 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH-KDFVIDQDNNWMLQGWKGRIVFASSCWVP 835 F+ I++GSYNAPFFVTRFRE +FH+SSLFDM DT + REDP R+MFE+E YGRE MNV+ACEG ERVERPE+YKQWQAR +RAGF+Q+PL +EL++KL +++ Y K+F +DQD +W+LQGWKGRIV+ SS WVP Sbjct: 556 FIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEFDVDQDCHWLLQGWKGRIVYGSSIWVP 693 HSP 2 Score: 28.4906 bits (62), Expect = 1.690e-53 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -1 Query: 834 VLKLIRKIKPDIF 872 VLKLIRKIKPD+F Sbjct: 544 VLKLIRKIKPDVF 556
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 2.201e-53 Identity = 92/138 (66.67%), Postives = 118/138 (85.51%), Query Frame = -2 Query: 422 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 835 F+ +I++G+YNAPFFVTRFREA+FH+S++FDM D+ + RED RLM+E+E YGRE +NV+ACEG ERVERPETYKQWQAR IRAGF+QLPL +ELM+ L K++ Y K+F +DQ+ NW+LQGWKGRIV+ASS WVP+ Sbjct: 630 FIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLWVPS 767 HSP 2 Score: 24.6386 bits (52), Expect = 2.201e-53 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -1 Query: 834 VLKLIRKIKPDIF 872 VLKLIRKI P++F Sbjct: 618 VLKLIRKINPNVF 630
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.146e-51 Identity = 91/137 (66.42%), Postives = 109/137 (79.56%), Query Frame = -2 Query: 425 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVP 835 FV IVNG+YNAPFFVTRFREA+FHFSS+FDM +T +PRED ER+ E EV+GREA+NVIACEG ERVERPETYKQW R +R+G Q+P + +M+ + K+ +YHKDFVIDQDN W+LQGWKGR V A S W P Sbjct: 578 FVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.310e-46 Identity = 83/140 (59.29%), Postives = 110/140 (78.57%), Query Frame = -2 Query: 422 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDP--ERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 835 FV + +NG YN+PFF+TRFREA+FH+SSLFDMFDTT+ ED R + ERE+ R+AM+VI+CEG ER RPETYKQW+ R +RAGFK +++++M++ ++ YH+DFVID DNNWMLQGWKGR+++A SCW PA Sbjct: 461 FVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPA 600 HSP 2 Score: 22.3274 bits (46), Expect = 2.310e-46 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = -1 Query: 834 VLKLIRKIKPDIF 872 VLKL R I PD+F Sbjct: 449 VLKLFRDINPDLF 461
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.280e-44 Identity = 81/138 (58.70%), Postives = 108/138 (78.26%), Query Frame = -2 Query: 422 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 835 FV + +NG+YN+PFF+TRFREA+FH SSLFDM++TT+ +D R + ERE+ R+AM+VIACEG ER RPETYKQWQ R +RAGF+ L++++++ +K YHKDFVID DN+WM QGWKGR+++A SCW PA Sbjct: 444 FVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKPA 581
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.073e-19 Identity = 43/125 (34.40%), Postives = 76/125 (60.80%), Query Frame = -2 Query: 431 NAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 805 N F+ RF E + ++S++F+ D +PR++ ER+ E+ ++ +N+IACEG +RVER E +W++R AGF+ PL+ + ++ KL A Y + +D+ + ML GW+ R + ++S W Sbjct: 447 NTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLS-SYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17 Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 431 NAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 805 N F RF E + +++++F+ D T+PR+D ER+ E+ RE +N+IACEG ER ER E + +W+AR AGF+ PL+ L+ + L Y ++ + + + + GWK R + SS W Sbjct: 420 NTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLS-SLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of CX043946 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17 Identity = 45/138 (32.61%), Postives = 79/138 (57.25%), Query Frame = -2 Query: 431 LIFFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 844 L+ V VN + +PFF RF EA ++S++F+ D T+PRE ER+ ER+ R+ +N++ACEG ER+ER E +W+AR + AGF P++ ++ + +K Y + + ++ + W+ + + +S W Sbjct: 457 LVTVVEQDVNTN-TSPFF-PRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592 The following BLAST results are available for this feature:
BLAST of CX043946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043946 ID=CX043946; Name=CX043946; organism=Citrus sinensis; type=EST; length=872bpback to top |