CX043933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.645e-83 Identity = 142/180 (78.89%), Postives = 161/180 (89.44%), Query Frame = -3 Query: 245 MIRLFKVKEKQKEDAENNT-GGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYF 781 MI LFKVKEKQ+E A+N T GG VKKQ AGELRLHKDI+ELNLP +C ISFPNG+DDLMNFEVSIKPD+GYY NGTFVF+F+V P+YPH+APKVKCKTKVYHPNIDLEGNVCLN+LREDWKPVLNINT+IYGL+HLFTEPN EDPLNHDAA +LRD+P FE+NVR A+ GGY+G +F Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.081e-78 Identity = 136/185 (73.51%), Postives = 161/185 (87.03%), Query Frame = -3 Query: 233 MIRLFKVKEKQKEDAENNTG--GTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFEPVM 781 MI LFKVKEKQ+E++++N G + VKKQ AGELRLHKDI+ELNLP++CKISFPNG++DLMNFEV+IKPDEGYY +G FVFSF+V +YPH+APKVKCKTKVYHPNIDLEGNVCLN+LREDWKPVLNINT+IYGL+HLFTEPN+EDPLNH+AA +LRD+P FE NVR A+ GG +G F M Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTSFPRCM 185
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.556e-60 Identity = 113/182 (62.09%), Postives = 143/182 (78.57%), Query Frame = -3 Query: 242 MIRLFKVKEKQKEDAENNTGGTP--VKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFE 781 MI+LF +K+++KE E + GGT KK A +LR+ KDITELNLP+ C+I F + DDL+NF++ I PDEG+Y+ G FVFSF+V YPHD PKVKC+T VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF EPN EDPLN +AAE+L+++ FE NV+ +++GGYIG YFE Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEFSD-HDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 179
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.694e-60 Identity = 113/182 (62.09%), Postives = 143/182 (78.57%), Query Frame = -3 Query: 242 MIRLFKVKEKQKEDAENNTGGTP--VKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFE 781 MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C ISF + DDL+NF++ I PDEG+Y++G FVFSF+V YPHD PKVKC+T VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF EPN EDPLN +AAE+L+++ FE NV+ +++GGYIG YFE Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 179
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.694e-60 Identity = 113/182 (62.09%), Postives = 143/182 (78.57%), Query Frame = -3 Query: 242 MIRLFKVKEKQKEDAENNTGGTP--VKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFE 781 MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C ISF + DDL+NF++ I PDEG+Y++G FVFSF+V YPHD PKVKC+T VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF EPN EDPLN +AAE+L+++ FE NV+ +++GGYIG YFE Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 179
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.694e-60 Identity = 113/182 (62.09%), Postives = 143/182 (78.57%), Query Frame = -3 Query: 242 MIRLFKVKEKQKEDAENNTGGTP--VKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFE 781 MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C ISF + DDL+NF++ I PDEG+Y++G FVFSF+V YPHD PKVKC+T VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF EPN EDPLN +AAE+L+++ FE NV+ +++GGYIG YFE Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 179
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.712e-60 Identity = 112/182 (61.54%), Postives = 142/182 (78.02%), Query Frame = -3 Query: 242 MIRLFKVKEKQKEDAENNTGGTP--VKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFE 781 MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C+I F + DDL+NF++ I PDEG+Y+ G FVFSF+V YPHD PKVKC+T VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF EPN EDPLN +AAE+L+++ FE NV+ +++GGYIG YFE Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEFSD-HDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 179
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.239e-56 Identity = 104/180 (57.78%), Postives = 137/180 (76.11%), Query Frame = -3 Query: 242 MIRLFKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFE 781 MI+LF +K+ QK+D E G+ KK A +LR+ KDI ELNLP C FP+ +DL+NF++ I PDEG+Y++G FVF+F V YPH+ PKVKC T+VYHPNIDL+GNVCLN+LREDW PVLNIN+I+YGL LF EPN EDPLN +AA++L+ + FE+NV+ A++GG +G+ YFE Sbjct: 1 MIKLFTLKQ-QKKDGEQK--GSQQKKASAAQLRIQKDINELNLPNTCATDFPD-PNDLLNFKLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKKAMRGGCVGETYFE 176
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.406e-50 Identity = 94/183 (51.37%), Postives = 131/183 (71.58%), Query Frame = -3 Query: 233 MIRLFKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFEPVM 781 M++++ +KEKQ + GG+ KK A +LR+ KD++EL+LP K FP+ +D +MNFE++++PDEG+YQ G F FSF V P +PH+ PKVKC KVYHPNIDLEGNVCLN+LREDWKPVL++N ++ GL +LF EPN DPLN DAA + + F+ NV+ ++ GG + E F+ V+ Sbjct: 1 MLKIWSMKEKQAAE-----GGSAKKKVTAAQLRVQKDLSELSLPSTMKTHFPSAED-IMNFELTVRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVKHSMAGGSVAGERFDCVL 177
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.528e-47 Identity = 89/179 (49.72%), Postives = 122/179 (68.16%), Query Frame = -3 Query: 233 FKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPAYFESNVRMALQGGYIGDEYFEPVM 769 F +K KQ ++ + K+ ELR KDI E+ +P C +SF + +D++NF +SI P +G YQ+ TF F+ +P YP+D PKV C T VYHPNIDLEG+VCLN+LR+DW PVLNI T+I+GL LF EPN +DPLN DAA+L+ D+ FE+NVR +L+GGYI + F ++ Sbjct: 60 FSLKTKQSSESGS-------KRANPAELRAQKDIDEMEVPTGCAVSFKD-TNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQSLRGGYISNRQFPKLL 230 The following BLAST results are available for this feature:
BLAST of CX043933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043933 ID=CX043933; Name=CX043933; organism=Citrus sinensis; type=EST; length=816bpback to top |