DC900451

Overview
NameDC900451
Unique NameDC900451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length248
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7398 contig Csv1_Contig7398:439..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900451 vs. ExPASy Swiss-Prot
Match: MPK19_ARATH (Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.196e-18
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = 2
Query:   11 FXYPSAIGQFRKQFAYLEENGGRSGPVIPPERKHVSLPRSTVHSGTTPPIVQHNAASSESQQMTEDTSRN 220
            F YPSAIG  RKQFAYLEEN G+SGPVIPP+RKH SLPRS VHS       Q +  +S+S++++ + SRN
Sbjct:  375 FLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHASLPRSAVHSSAVNSNAQPSLNASDSRRVSIEPSRN 444          
BLAST of DC900451 vs. ExPASy Swiss-Prot
Match: MPK18_ARATH (Mitogen-activated protein kinase 18 OS=Arabidopsis thaliana GN=MPK18 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 5.874e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 2
Query:    8 DFXYPSAIGQFRKQFAYLEENGGRSGPVIPPERKHVSLPRSTVHSGTTPPIVQHNAASSESQQMTEDTSRN 220
            +F YPSAIG  R+QF YLEEN  R+GPVIP ERKH SLPRSTVHS       Q N  +++S++++ + S+N
Sbjct:  363 NFVYPSAIGHLRQQFTYLEENSSRNGPVIPLERKHASLPRSTVHSTVVHSTSQPNLGATDSRRVSFEPSKN 433          
BLAST of DC900451 vs. ExPASy Swiss-Prot
Match: MPK8_ORYSJ (Mitogen-activated protein kinase 8 OS=Oryza sativa subsp. japonica GN=MPK8 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.600e-13
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 2
Query:    8 DFXYPSAIGQFRKQFAYLEENGGRSGPVIPPERKHVSLPR-STVHSGTTPPIVQHNAASSESQQMTEDTSR 217
            +F YPSA+  FR+QFA LEENGG++G  +P +RKHVSLPR +TVHS   PP    N  S   Q++   T R
Sbjct:  363 NFLYPSALDNFRRQFANLEENGGKNGDAVPSDRKHVSLPRTTTVHSAPIPPKDHQNITSQVPQRIPGRTGR 433          
BLAST of DC900451 vs. ExPASy Swiss-Prot
Match: MPK10_ORYSJ (Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica GN=MPK10 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.939e-13
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 2
Query:   11 FXYPSAIGQFRKQFAYLEENGGRSGPVIPPERKHVSLPRSTVHSGTTPPIVQHNAASSESQQMTEDTSRNFXVTDEISG 247
            F YPSA+ QFRKQFA+LEENGG +GPVIP +RKH SLPRST+   T  P  +         + +++   N    D  SG
Sbjct:  376 FLYPSAVDQFRKQFAHLEENGG-NGPVIPMDRKHTSLPRSTIVHSTPIPAKEQPRIGPSRDKPSDEPYSNPREFDRFSG 453          
BLAST of DC900451 vs. ExPASy Swiss-Prot
Match: MPK20_ARATH (Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.017e-12
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 2
Query:   11 FXYPSAIGQFRKQFAYLEENGGRSGPVIPPERKHVSLPRSTVHSGTTPPIVQHNAASSESQQMTEDTSRN 220
            F YPSA+ QFR+QFA+LEEN G++GPV P ERKH SLPRSTV   T           + +  +  +T++N
Sbjct:  376 FLYPSAVDQFRRQFAHLEENSGKTGPVAPLERKHASLPRSTVIHSTAVARGGQPKLMNNTNTLNPETTQN 445          
BLAST of DC900451 vs. ExPASy Swiss-Prot
Match: MPK9_ORYSJ (Mitogen-activated protein kinase 9 OS=Oryza sativa subsp. japonica GN=MPK9 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11
Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   11 FXYPSAIGQFRKQFAYLEENGGRSGPVIPPERKHVSLPRS-TVHSGTTPPIVQHNAAS-SESQQMTEDTSRNFXVTDEISG 247
            F YPSA+ QF+KQF+ LEE+ G SG  IP ERKH SLPRS TVHS   PP  Q  AAS   S+ ++++  +N  V    SG
Sbjct:  458 FLYPSAVDQFKKQFSNLEESNG-SGSAIPMERKHASLPRSTTVHSTPIPPKEQPLAASLKSSRPVSDEPCKNPWVMGGFSG 537          
The following BLAST results are available for this feature:
BLAST of DC900451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MPK19_ARATH8.196e-1860.00Mitogen-activated protein kinase 19 OS=Arabidopsis... [more]
MPK18_ARATH5.874e-1654.93Mitogen-activated protein kinase 18 OS=Arabidopsis... [more]
MPK8_ORYSJ1.600e-1352.11Mitogen-activated protein kinase 8 OS=Oryza sativa... [more]
MPK10_ORYSJ7.939e-1348.10Mitogen-activated protein kinase 10 OS=Oryza sativ... [more]
MPK20_ARATH3.017e-1248.57Mitogen-activated protein kinase 20 OS=Arabidopsis... [more]
MPK9_ORYSJ1.146e-1151.85Mitogen-activated protein kinase 9 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionDC900451 VSS Citrus sinensis cDNA clone VSSJ033 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900451 ID=DC900451; Name=DC900451; organism=Citrus sinensis; type=EST; length=248bp
GGCACGAGATTTTNTCTATCCTAGTGCTATAGGCCAATTCAGAAAGCAGT
TTGCATATCTCGAGGAAAATGGTGGAAGAAGTGGTCCGGTGATTCCTCCA
GAGAGGAAGCATGTNTCCCTCCCGCGGTCTACAGTTCACTCAGGCACAAC
CCCTCCTATTGTACAGCATAATGCTGCTTCATCTGAGAGCCAGCAAATGA
CAGAGGACACTTCTAGAAATTTTAGNGTAACTGATGAAATTTCTGGAA
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