CX043895

Overview
NameCX043895
Unique NameCX043895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1017 contig Csv1_Contig1017:20..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043895 vs. ExPASy Swiss-Prot
Match: NUDT9_ARATH (Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.862e-66
Identity = 119/182 (65.38%), Postives = 149/182 (81.87%), Query Frame = -2
Query:  251 EDDVIQCQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGST--DSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQGGFALYKLMVEAMNN 790
            EDD ++C+HT+SPLGNGAV+ETSDKKI++L+RSNNVGEFPGH+VFPGGHPEP   GI  H   +     E +N KV+QEMFDSI  EVVEE G+P+ SL +PLFIGISRR LNVRPA FF++KCS  S++IQ+LYS+A+DG+ESTQL  VS+ EL+ M S+MPGCH GGFALY+LM++ + N
Sbjct:  121 EDDSVRCRHTSSPLGNGAVIETSDKKIIVLRRSNNVGEFPGHYVFPGGHPEPTAVGIDYHQLENNVQTGEVLNKKVTQEMFDSIICEVVEETGIPASSLSSPLFIGISRRELNVRPAMFFYLKCSHHSDDIQRLYSSAEDGFESTQLHTVSLDELKMMTSRMPGCHHGGFALYELMLQRLKN 302          
BLAST of CX043895 vs. ExPASy Swiss-Prot
Match: NUD22_HUMAN (Nucleoside diphosphate-linked moiety X motif 22 OS=Homo sapiens GN=NUDT22 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.346e-18
Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = -2
Query:  278 HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTD-SEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYESTQLFAVS------MIELENMASKMPGCHQGGFALY 766
            + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ       P GS    +     V  E+F S+ +E+ +E+ +P  +L  PL +GI+R   +  R +A F+++CSL S ++++ Y S   + +EST +F V       ++E E  A   P   +G   LY
Sbjct:  116 YLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQ----ALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYLSGGPEAHESTGIFFVETQNVRRLLETEMWAELCPSA-KGAIILY 282          
BLAST of CX043895 vs. ExPASy Swiss-Prot
Match: NUD22_MOUSE (Nucleoside diphosphate-linked moiety X motif 22 OS=Mus musculus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17
Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = -2
Query:  323 HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQ---DAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYESTQLFAVSMIELENM 766
            + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     GI  H       +     V +E+F S+ +E+ +E+ +P  +L  PL +GI+    +  R +A F+++CSL S E++  Y S   + +EST +  V    ++ +
Sbjct:  115 YLADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGGIPRH------KDLPGLLVVRELFSSVLQEICDEVNLPLHTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEEVRSYYLSGGPEAHESTGIIFVETQRVQRL 261          
BLAST of CX043895 vs. ExPASy Swiss-Prot
Match: NUD22_RAT (Nucleoside diphosphate-linked moiety X motif 22 OS=Rattus norvegicus GN=Nudt22 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.646e-17
Identity = 52/150 (34.67%), Postives = 81/150 (54.00%), Query Frame = -2
Query:  323 HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYESTQLFAVSMIELENM 766
            + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ     S P      +     V +E+F S+ +EV +E+ +P  +L  PL +GI+    +  R +A F+++CSL S E++  Y S   +  EST +  V    ++ +
Sbjct:  115 YLADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGSIP---QHEDLPGELVVRELFSSVLQEVCDEVNLPLHTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEEVRNYYLSGGPEANESTGIIFVETQRVQRL 261          
BLAST of CX043895 vs. ExPASy Swiss-Prot
Match: NUD22_BOVIN (Nucleoside diphosphate-linked moiety X motif 22 OS=Bos taurus GN=NUDT22 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16
Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = -2
Query:  323 HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNEIQQLY-STAQDGYESTQLFAVSMIELENM 766
            + A PLG GA + T+D  ++ L+RS  V E PG    PGGHPEPQ       P      +     V  E+F S+ +E+ +E+ VP  +L  PL +GI+    +  R +A F+++CSL S ++++ Y S   + +EST +  V    ++ +
Sbjct:  116 YLADPLGVGAALATADDFLVFLRRSGQVAEAPGLVDVPGGHPEPQALCPGDSP---LHKDLPGELVVHELFSSVLQEICDEVNVPPLTLSQPLLLGIACNETSAGRASAEFYVQCSLTSEQVRRHYMSGGPEAHESTGIIFVEKQSMQRL 262          
The following BLAST results are available for this feature:
BLAST of CX043895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NUDT9_ARATH3.862e-6665.38Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9... [more]
NUD22_HUMAN1.346e-1834.88Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_MOUSE4.330e-1733.99Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_RAT9.646e-1734.67Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
NUD22_BOVIN1.645e-1633.33Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_14B03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14B03-D6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043895 ID=CX043895; Name=CX043895; organism=Citrus sinensis; type=EST; length=791bp
AATATAATCAATTAACTCACGACAGACTTACAATAATTTTGATGAAAACA
GTCACGTGCATCAATTAGCAAAGAGAAATCAATGCAATTGCATAATCATG
CCTTTATCATGTGTTGATTAACTATACTTTTTAGAGAAAGAATCTAGTAC
GTCTCCTTTAATTCTGCTGTTTATCAACTATAATGTAAAATATTAGTGGA
GGAAAAGCAAAGCCGCAGACTGCCATGGACTCTCATGAATTTTATGGTAT
ATTATTCATAGCTTCTACCATCAGCTTATAAAGAGCAAATCCACCTTGAT
GGCAGCCAGGCATTTTAGACGCCATGTTCTCCAACTCAATCATTGAAACT
GCAAAAAGTTGGGTTGATTCATAGCCATCTTGTGCGGTAGAATACAACTG
TTGAATTTCGTTTGACTGAAGACTGCATTTTATGAAGAAAAAAGCAGCTG
GTCTAACATTCAAACGCCTGCGGGATATACCAATGAAAAGTGGGTTGCAA
AGAGATTCTGAAGGTACTCCAATTTCTTCAACCACTTCGCGAGTAATGCT
GTCAAACATTTCTTGAGAAACCTTGTGGTTTATAAACTCAGAGTCTGTTG
ACCCACACGGATGAGATGTAATTCCAGCATCTTGGGGCTCTGGATGGCCT
CCTGGAAAGACAAAGTGCCCAGGAAATTCGCCAACATTATTACTTCTTTG
CAACAAGAGTATTTTCTTGTCAGATGTCTCTACCACTGCACCATTACCCA
AGGGACTTGCAGTGTGCTGACATTGGATCACATCATCTTCT
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