CX043890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043890 vs. ExPASy Swiss-Prot
Match: GP107_MOUSE (Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.013e-30 Identity = 55/101 (54.46%), Postives = 79/101 (78.22%), Query Frame = -3 Query: 376 LVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 678 LVD++CC A+LFP+VWSI++L+EA+ TDGKAA+NL KL LFR YY++++CYIYFTR++ + L+ +++ W + E ATL F+V TGYKF+P + NPY Sbjct: 405 LVDLLCCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPY 505
BLAST of CX043890 vs. ExPASy Swiss-Prot
Match: GP108_HUMAN (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29 Identity = 55/101 (54.46%), Postives = 78/101 (77.23%), Query Frame = -3 Query: 376 LVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 678 LVD++CC A+LFP+VWSI++L++A+ TDGK AVNL KL LFR YY++VICY+YFTR++ L+ +++ W + E +TLAF+V TGYKF+P +NPY Sbjct: 404 LVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPY 504
BLAST of CX043890 vs. ExPASy Swiss-Prot
Match: GP108_MOUSE (Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29 Identity = 55/101 (54.46%), Postives = 77/101 (76.24%), Query Frame = -3 Query: 376 LVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 678 LVD++CC A+LFP+VWSI++L++A+ TDGK AVNL +L LFR YY++VICYIYFTR++ L+ +++ W + E +TLAF+V TGYKF+P NPY Sbjct: 430 LVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPY 530
BLAST of CX043890 vs. ExPASy Swiss-Prot
Match: GP108_RAT (Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29 Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = -3 Query: 376 LVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 678 LVD++CC A+LFP+VWSI++L++A+ TDGK A+NL KL LFR YY++VICYIYFTR++ L +++ W + E +TLAF+V TGYKF+P NPY Sbjct: 437 LVDLICCGAILFPVVWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPY 537
BLAST of CX043890 vs. ExPASy Swiss-Prot
Match: GP108_BOVIN (Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29 Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = -3 Query: 376 LVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 678 LVD++CC +LFP+VWSI++L++A+ TDGK AVNL KL LFR YY++VICYIYFTR++ L + +++ W + E +TLAF+V TGYKF+P NPY Sbjct: 409 LVDLICCGTILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPARDNPY 509
BLAST of CX043890 vs. ExPASy Swiss-Prot
Match: GP107_HUMAN (Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.070e-23 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = -3 Query: 376 LVDVVCCCAVLFPIVWSIKNLREAARTDGK------------------------------------------------AAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 678 LVD++CC A+LFP+VWSI++L+EA+ TDGK AA+NL KL LFR YY++++CYIYFTR++ + L+ +++ W + E ATL F+V TGYKF+P + NPY Sbjct: 406 LVDLLCCGAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPY 554 The following BLAST results are available for this feature:
BLAST of CX043890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043890 ID=CX043890; Name=CX043890; organism=Citrus sinensis; type=EST; length=680bpback to top |