CX043889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043889 vs. ExPASy Swiss-Prot
Match: GP107_HUMAN (Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.865e-31 Identity = 77/213 (36.15%), Postives = 115/213 (53.99%), Query Frame = 2 Query: 161 FTFNNLNGKSEYNTIYSENDADQ---YTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRD-YLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLL 784 F+ +N G + ++ + DQ Y+L F CL + ++ D + ++E N D YLSAG+ LP++Y + +F +WIH+L ++R VF+IH+ M A D YI G GW V++Y+ LKG LF I LIGTGW+F+K L DK+KK+ MIVIPLQV+AN+A ++I+ T ++ WK L Sbjct: 195 FSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGK-ELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFL 406
BLAST of CX043889 vs. ExPASy Swiss-Prot
Match: GP107_MOUSE (Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.672e-29 Identity = 75/213 (35.21%), Postives = 110/213 (51.64%), Query Frame = 2 Query: 161 FTFNNLNGKSEYNTIYSENDADQ---YTLVFANCLQQLKVSMDVRSAMYNLE-GRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLL 784 F+ + +G + ++ + DQ Y+L F C + S N+ N YLSAG+ LP++Y +L +F +WIH+L ++R VF+IH+ M A D YI G GW V++Y+ LKG LF I LIGTGW+F+K L DK+KK+ MIVIPLQV+AN+A ++I+ T ++ WK L Sbjct: 193 FSIHKNDGVVSFQFFFNISTDDQEGLYSLYFHKCSGNNVKPGEQASFSLNIAITEKNPNSYLSAGEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFL 405
BLAST of CX043889 vs. ExPASy Swiss-Prot
Match: GP108_HUMAN (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 4.712e-24 Identity = 70/219 (31.96%), Postives = 110/219 (50.23%), Query Frame = 2 Query: 143 DLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCLQQL---KVSMDVRSAMYNLEGRSNNRD-YLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLL 784 DL+ + NN S + I S+ + QY+L F NC + + D+ + R N D +LSA + L ++Y + S + W+ +L R +VF+IH+ M + + +I G G V++Y+ LKG LF I LIG+GW+F+K L DKEKKV IVIP+QV+AN+A ++I+ D++ WK++ L Sbjct: 191 DLVLGLSHLNNSYNFSFHVVIGSQAEEGQYSLNFHNCNNSVPGKEHPFDITVMI-----REKNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFL 404
BLAST of CX043889 vs. ExPASy Swiss-Prot
Match: GP108_RAT (Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.886e-23 Identity = 71/222 (31.98%), Postives = 107/222 (48.20%), Query Frame = 2 Query: 137 QSDLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCL-----QQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLL 784 + DL+ + N+ S + I S + QY+L F NC Q+ + V N EG +LSA + L ++Y + S + W+ VL + +VF+IH+ M + + +I G G V+ Y+ LKG LF I LIG+GW+F+K L DKEKK+ IVIPLQV+AN+A +VI+ D+ WK++ L Sbjct: 222 EKDLVLGLGHLNDSYNFSFHIVIGSRAEEGQYSLNFHNCYNTIPGQEQPFDLTVMIREKNPEG------FLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFL 437
BLAST of CX043889 vs. ExPASy Swiss-Prot
Match: GP108_MOUSE (Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.825e-22 Identity = 70/222 (31.53%), Postives = 106/222 (47.75%), Query Frame = 2 Query: 137 QSDLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCL-----QQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLL 784 + D + + N+ S + I S + QY+L F NC Q+ + V N EG +LSA + L ++Y + S + W+ VL + +VF+IH+ M + + +I G G V+ Y+ LKG LF I LIG+GW+F+K L DKEKK+ IVIPLQV+AN+A +VI+ D+ WK++ L Sbjct: 215 EKDQVLGLGHLNDSYNFSFHIVISSRAEEGQYSLNFHNCHNSIPGQEQPFDLTVMIREKNPEG------FLSAAEIPLFKLYLIMSACFLAADIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFL 430
BLAST of CX043889 vs. ExPASy Swiss-Prot
Match: GP108_BOVIN (Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.283e-21 Identity = 68/218 (31.19%), Postives = 104/218 (47.71%), Query Frame = 2 Query: 143 DLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLE---GRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLL 784 +L+ + NN S + I S + QY L F NC S+ R +++ N YLSA + L ++Y + S + W+ +L + VF+IH+ M + + +I G G V+ Y+ LKG LF I LIG+GW+F+K L DKEKK+ IVIPLQV+AN+A +V++ D+ WK++ L Sbjct: 196 ELVLGLGHLNNSYNFSFHVVIGSRAEEGQYNLNFHNCDN----SVPGREQPFDITVMIREKNPEGYLSAAEIPLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREEGASDYGIWKEILFL 409 The following BLAST results are available for this feature:
BLAST of CX043889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043889 ID=CX043889; Name=CX043889; organism=Citrus sinensis; type=EST; length=785bpback to top |