CX043878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONH1_ARATH (Lon protease homolog 1, mitochondrial OS=Arabidopsis thaliana GN=LON PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.609e-55 Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = -1 Query: 508 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWR-QHSKL 861 IHFPAGAVPKDGPSAGVTLVTALVSLFS+KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILP+RN KDLVEVPAAVL+SLE+ILAKRMEDVLE AFEGGCPWR +SKL Sbjct: 770 IHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVEVPAAVLSSLEVILAKRMEDVLENAFEGGCPWRNNYSKL 888
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONH1_MAIZE (Lon protease homolog 1, mitochondrial OS=Zea mays GN=LON1 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.696e-49 Identity = 97/118 (82.20%), Postives = 107/118 (90.68%), Query Frame = -1 Query: 508 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 861 IHFPAGAVPKDGPSAGVTLVTALVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL EVP +L+ +EI+L KR+E+VL+ AFEG CP R SKL Sbjct: 768 IHFPAGAVPKDGPSAGVTLVTALVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLSEVPLPILSDMEILLVKRIEEVLDHAFEGRCPLRSRSKL 885
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONH1_SPIOL (Lon protease homolog 1, mitochondrial OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.643e-44 Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = -1 Query: 565 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRME 861 IHFPAGAVPKDGPSAGVTLVTALVSL S+KR+RADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDLVEVP+AVL++LEII AKRME Sbjct: 771 IHFPAGAVPKDGPSAGVTLVTALVSLLSQKRMRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLVEVPSAVLSNLEIIYAKRME 869
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONP2_DANRE (Peroxisomal Lon protease homolog 2 OS=Danio rerio GN=lonp2 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.669e-36 Identity = 73/111 (65.77%), Postives = 91/111 (81.98%), Query Frame = -1 Query: 529 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 861 +HFPAGAV KDGPSAGVT+VT L SL S + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR +KR+I+P+RN KDL E+PA V A L+ +LA +++VL AF+GG P Sbjct: 718 LHFPAGAVTKDGPSAGVTIVTCLASLLSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRANLKRIIIPKRNEKDLEEIPANVRADLDFVLAGTLDEVLNAAFDGGFP 828
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONP2_MOUSE (Peroxisomal Lon protease homolog 2 OS=Mus musculus GN=Lonp2 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.821e-35 Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = -1 Query: 529 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 861 +HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K++I+P+RN KDL E+P+ V L + A +++VL AF+GG P Sbjct: 730 LHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQIIIPQRNEKDLEEIPSNVRQDLSFVTASCLDEVLNAAFDGGFP 840
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONP2_BOVIN (Peroxisomal Lon protease homolog 2 OS=Bos taurus GN=LONP2 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.298e-35 Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = -1 Query: 535 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 861 +HFPAGAV KDGPSAGVT+ T L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK LAAHR G+KRVI+P+RN KDL E+PA V L I A +++VL AF+GG Sbjct: 730 LHFPAGAVTKDGPSAGVTIATCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKALAAHRAGLKRVIIPQRNEKDLEEIPANVRQDLSFITASCLDEVLNAAFDGG 838
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONP2_RAT (Peroxisomal Lon protease homolog 2 OS=Rattus norvegicus GN=Lonp2 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 9.037e-35 Identity = 70/109 (64.22%), Postives = 88/109 (80.73%), Query Frame = -1 Query: 535 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 861 +HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K +I+P+RN KDL E+P+ V L + A +++VL AF+GG Sbjct: 730 LHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKHIIIPQRNEKDLEEIPSNVKQDLSFVTASCLDEVLNAAFDGG 838
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONP2_XENLA (Peroxisomal Lon protease homolog 2 OS=Xenopus laevis GN=lonp2 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.629e-34 Identity = 72/109 (66.06%), Postives = 87/109 (79.82%), Query Frame = -1 Query: 535 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 861 +HFPAGAV KDGPSAGV +VT L SLFS + V +D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVILP+RN DL E+P V LE +LA +++VL AF+GG Sbjct: 734 LHFPAGAVTKDGPSAGVAIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVILPKRNETDLEEIPLNVRQDLEFVLAGSLDEVLNAAFDGG 842
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LONP2_PONAB (Peroxisomal Lon protease homolog 2 OS=Pongo abelii GN=LONP2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.485e-34 Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = -1 Query: 535 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 861 +HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A +++VL AF+GG Sbjct: 730 LHFPAGAVTKDGPSAGVTIVTCLASLFSERLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 838
BLAST of CX043878 vs. ExPASy Swiss-Prot
Match: LON2_MYXXA (ATP-dependent protease La 2 OS=Myxococcus xanthus GN=lonD PE=1 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = -1 Query: 541 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 861 +HFPAG++PKDGPSAGVT++TAL SL + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDL++VP LE I M+DVL+ A E Sbjct: 689 LHFPAGSIPKDGPSAGVTILTALTSLLTGIRVRHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAALE 795 The following BLAST results are available for this feature:
BLAST of CX043878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043878 ID=CX043878; Name=CX043878; organism=Citrus sinensis; type=EST; length=861bpback to top |