CX043871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_DROPS (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15091 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 43/158 (27.22%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 495 ED +++ + G D+ G + GK+FPA + E+ Y+ K+ + G + I Y HT + +NYP LR +Y LP + K L+ Y +HP W+++ F T F++ + K+ + +++L++ I K ++EIP ++ +D Sbjct: 375 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLI-KLLDPIVKGDYVISYFHT-LTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTT----FMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYD 526
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_DROME (Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 43/158 (27.22%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 495 ED +++ + G D+ G + GK+FPA + E+ Y+ K+ + G + I Y HT + +NYP LR +Y LP + K L+ Y +HP W+++ F T F++ + K+ + +++L++ I K ++EIP ++ +D Sbjct: 373 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLI-KLLDPIVKGDYVISYFHT-LTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTT----FMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYD 524
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12 Identity = 45/155 (29.03%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 495 ED SD+ +L+ G D G + +VG+ P ++ E+ Y H + + + +VY HT + E N+P L+ +Y+ + + K L+ +YF+HP S+++ F +S GL K+ V L L++ + +IEIP FV ++D Sbjct: 328 EDLSDIAALKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIHMM-DHVAAKEYVLVYFHT-LTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTTFTVS-GLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYD 479
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_RAT (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12 Identity = 45/155 (29.03%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 495 ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + + +VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S GL KI +V LQ L++ I +I+ P FV +D Sbjct: 329 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS-GLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYD 480
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPD 543 ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + + +VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S GL KI +V L L++ I +I+ P FV +D T Y PD Sbjct: 293 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS-GLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYPPSPD 460
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPD 543 ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + + +VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S GL KI +V L L++ I +I+ P FV +D T Y PD Sbjct: 329 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS-GLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYPPSPD 496
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 44/155 (28.39%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 495 ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + + +VY HT + + N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S GL KI +V LQ L++ I +I+ P FV +D Sbjct: 330 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS-GLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYD 481
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_DANRE (Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio GN=gdap2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 43/156 (27.56%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDN 498 ED SD+ +L+ G D G + +VG+ P ++ E+ Y H + + + +VY HT + E N+ L+ +Y+ + ++ K L+ YF+HP S+++ F +S GL K+ ++ LQ L+ + +I+IP FV +D+ Sbjct: 338 EDLSDIAALKALYQTGVDLCGRTVMVVVGRNIPVMLIDMEKALLYFIH-VMDHITVKEYVMVYFHT-LTGEHNHLDTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKVSTWFFTTFSVS-GLKDKVHHIENLQQLFTCVLPEQIDIPPFVLEYDS 490
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_BOVIN (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPD 543 ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + + +VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S GL KI +V L L++ I +I+ P FV +D T Y PD Sbjct: 329 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS-GLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYLPSPD 496
BLAST of CX043871 vs. ExPASy Swiss-Prot
Match: GDAP2_XENLA (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 48/163 (29.45%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 31 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPL 519 ED SD+ +L+ G D G + +VG+ P ++ E+ Y H + + + +VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S GL K+ V L L+ I +IEIP FV ++D E+ PL Sbjct: 328 EDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVTAKDYVLVYFHT-LTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFFTTFTVS-GLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYD-ARENGPL 486 The following BLAST results are available for this feature:
BLAST of CX043871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043871 ID=CX043871; Name=CX043871; organism=Citrus sinensis; type=EST; length=783bpback to top |