CX043810

Overview
NameCX043810
Unique NameCX043810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1131 contig Csv1_Contig1131:3..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNJ11_ARATH (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 61/149 (40.94%), Postives = 82/149 (55.03%), Query Frame = 3
Query:  129 STSVKFRPLRVSASACASTAERTRTHHHIT---SPGPGSLYEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQ-NENSAYKFMKLHEAYETLSDPKKRADYDRTLFXXXXXXXXXFAVSGVANTMATSSNSRFCAYSRRTWETDQCW 563
            S + +  P  VSAS   +  E +   H I    +  P SLY+VL +  GAT Q+IK+AYR+LAR+ HPDVA   + + +SA +FMK+H AY TLSDP+KR+ YDR +                 +   T   S   +Y  R WETDQCW
Sbjct:   27 SRTARISPPLVSASCSYTYTEDSPRLHQIPRRLTTVPASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPEKRSVYDRRMLR--------------RSRPLTVGTSGLGSYVGRNWETDQCW 161          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YE+LG+   AT +EIK AYRKLAR  HPDV     + N+A KF +++EAYE LSDP+KRA YD+
Sbjct:    6 YEILGVARNATPEEIKKAYRKLARKYHPDV--NKDDPNAAEKFKEINEAYEVLSDPEKRARYDQ 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13
Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 3
Query:   57 STLASSAHLIGPGFITNETHSQSQSTSVKFRPLRVSASACASTAERTRTHHH--ITSPGPGSLYEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTL 437
            S L+++ H   P F   +  S  Q TS+       + +  +ST  ++R  H   +      S Y++LG+    T  EIK AY++LAR  HPDV+   + E    +F+++ EAYETLSDP++R  YDR L
Sbjct:    8 SILSTNHH---PFFYKQQPISSLQPTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDL 133          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+  GA+  EIK AYR+LA+  HPDV   S+ EN+  KF ++ EAYE LSD +KRA YD+
Sbjct:    7 YEVLGLSKGASTDEIKKAYRRLAKKYHPDV---SKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+  GA+  EIK AYR+LA+  HPDV   S+ EN+  KF ++ EAYE LSD +KRA YD+
Sbjct:    7 YEVLGLSKGASTDEIKKAYRRLAKKYHPDV---SKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+  GA+  EIK AYR+LA+  HPDV   S+ EN+  KF ++ EAYE LSD +KRA YD+
Sbjct:    7 YEVLGLSKGASTDEIKKAYRRLAKKYHPDV---SKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_EXISA (Chaperone protein dnaJ OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.129e-12
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+   A+ Q+IK AYRKLAR  HPD+   +Q  ++A KF ++ EAYE LSD +KRA YDR
Sbjct:    7 YEVLGLDKSASAQDIKRAYRKLARQYHPDI---NQEADAADKFKEIGEAYEVLSDEQKRAQYDR 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_BACWK (Chaperone protein dnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.699e-12
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+  GA+  EIK AYR+LA+  HPDV   S+ EN+  KF ++ EAYE LSD +KRA YD+
Sbjct:    7 YEVLGLSQGASKDEIKKAYRRLAKKYHPDV---SKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.699e-12
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+   A+ +E+K AYRKLAR  HPDV   ++ E++  KF ++ EAY+TLSDP+K+A YD+
Sbjct:    7 YEVLGVDRNASVEEVKKAYRKLARKYHPDV---NKEEDAEAKFKEVKEAYDTLSDPQKKARYDQ 67          
BLAST of CX043810 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHK (Chaperone protein dnaJ OS=Bacillus thuringiensis subsp. konkukian GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.699e-12
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  240 YEVLGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 431
            YEVLG+  GA+  EIK AYR+LA+  HPDV   S+ EN+  KF ++ EAYE LSD +KRA YD+
Sbjct:    7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDV---SKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
The following BLAST results are available for this feature:
BLAST of CX043810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DNJ11_ARATH7.894e-2140.94Chaperone protein dnaJ 11, chloroplastic OS=Arabid... [more]
DNAJ_CARHZ6.059e-1357.81Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
DNJ20_ARATH7.913e-1335.66Chaperone protein dnaJ 20, chloroplastic OS=Arabid... [more]
DNAJ_BACCR3.927e-1256.25Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC43.927e-1256.25Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC23.927e-1256.25Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_EXISA5.129e-1256.25Chaperone protein dnaJ OS=Exiguobacterium sp. (str... [more]
DNAJ_BACWK6.699e-1256.25Chaperone protein dnaJ OS=Bacillus weihenstephanen... [more]
DNAJ_BACSK6.699e-1253.13Chaperone protein dnaJ OS=Bacillus clausii (strain... [more]
DNAJ_BACHK6.699e-1256.25Chaperone protein dnaJ OS=Bacillus thuringiensis s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13E10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13E10-J19-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043810 ID=CX043810; Name=CX043810; organism=Citrus sinensis; type=EST; length=758bp
CACATCTTCAAAACAAAACACAACAAGTAATCTAATCATCGATTCAATCC
ATCATGTCTACTCTTGCATCTTCAGCCCATCTGATTGGCCCGGGATTTAT
CACCAACGAGACTCATTCACAATCACAGTCCACGTCTGTCAAATTCCGCC
CACTTCGCGTATCGGCATCGGCTTGCGCCTCAACGGCGGAGAGAACAAGA
ACCCATCATCACATTACTTCTCCTGGACCCGGCTCACTCTACGAAGTCCT
GGGGATTCAGACGGGTGCCACGTGTCAGGAAATCAAGACTGCTTATCGGA
AATTAGCAAGAGTTTTGCACCCGGATGTTGCCGCTAAGAGTCAAAATGAG
AATTCAGCATATAAGTTCATGAAATTACACGAAGCTTACGAAACTCTATC
AGATCCCAAGAAGCGTGCGGACTACGATCGTACCCTTTTCAGGAGAAGAA
GCCCATCGAGTTCCCCATTTGCTGTCTCGGGAGTGGCAAATACGATGGCC
ACTTCGTCGAATTCAAGATTTTGTGCCTACTCAAGGCGGACATGGGAGAC
TGATCAGTGCTGGTAGAAAATAAAATACATAGCTGCAACTGCAAGATTAT
GTTATATGATCTTAGCTGTTCAGGAATTAGGATTAGAGATGCTGCCCTTT
AACGTCTGGGGATTAATGCTAACGTGTGTAGATATTTATGATTGTAATTG
AAATTTGTTAATCCAGGCGGCATTTTTACAGCCTGCAATTGCAATGGGTA
CAATGTAA
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