CX043759

Overview
NameCX043759
Unique NameCX043759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX043759 vs. ExPASy Swiss-Prot
Match: WSD1_ARATH (O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.219e-59
Identity = 122/275 (44.36%), Postives = 174/275 (63.27%), Query Frame = 1 
Query:    1 EDYTSSLSQTGIKMSMPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLMSLLLACCRKVSDPNEVPTIPSVTKKIDSNGHSKGFWPYL--LFKLWLFWNTLVDVVMFIATALMFVRDTKTPLKGELGNGCLPRRFVHRSVSLDDVKLVRNAMNTTINDVMLGVTQAGLSRYLNRKYGQLNIIXXXXXXXXXXXXXXXXXATFFMNLRPSAGIQELANMLKKGSKAKWGNQIGYLIFPFTIALRDDPLDYLREAKVAMDRKKASLEASFSYFLSK 819
            EDYTS+++   + MS P+W+ HLLN+KTS AES+A++++HHS+GDG SLMSLLLAC RK+SDP+ + +  + TKK      S  +W ++   F + + + T+V+    + T + F+ DTK PL G   +G    + VHR +S +DVKL+++ MN  +NDV+LG+TQAGLSRYL+ KY                           +NLRP+  I++LA+M+ KGSK +WGN IG +IFP  +    DPL+Y+R AK  MDRKK SLEA F Y + K
Sbjct:  107 EDYTSNIANIPMDMSKPLWEFHLLNMKTSKAESLAIVKIHHSIGDGMSLMSLLLACSRKISDPDALVSNTTATKK---PADSMAWWLFVGFWFMIRVTFTTIVEFSKLMLT-VCFLEDTKNPLMGNPSDGFQSWKVVHRIISFEDVKLIKDTMNMKVNDVLLGMTQAGLSRYLSSKY------DGSTAEKKKILEKLRVRGAVAINLRPATKIEDLADMMAKGSKCRWGNFIGTVIFPLWVKSEKDPLEYIRRAKATMDRKKISLEAFFFYGIIK 371
The following BLAST results are available for this feature:
BLAST of CX043759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WSD1_ARATH2.219e-5944.36O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_13C04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13C04-F7-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043759 ID=CX043759; Name=CX043759; organism=Citrus sinensis; type=EST; length=825bp
GAAGATTATACCTCGAGCCTGAGCCAAACTGGGATCAAAATGTCAATGCC
AATGTGGGATCTCCATCTCCTCAACATTAAAACTTCGGATGCTGAATCTG
TTGCGGTTCTCCGCGTGCACCACTCTCTTGGTGACGGAACTTCTCTCATG
TCTCTTTTACTTGCTTGTTGCCGTAAAGTTTCTGATCCAAATGAAGTACC
CACCATTCCTTCGGTTACTAAGAAAATTGATTCCAATGGTCACTCCAAAG
GGTTTTGGCCTTACTTGTTGTTCAAGTTATGGTTGTTTTGGAACACTCTT
GTTGATGTTGTCATGTTTATTGCGACGGCATTGATGTTTGTAAGGGATAC
CAAAACGCCCCTCAAAGGTGAACTGGGAAATGGTTGTCTTCCTCGGCGGT
TTGTTCATAGATCAGTCAGCTTGGATGATGTCAAGCTTGTGAGGAATGCG
ATGAACACTACGATCAATGATGTTATGCTTGGAGTCACCCAAGCAGGCTT
GTCTCGGTATCTCAATCGGAAATATGGCCAATTGAATATTATTAACGGTC
TATCGGAAAGAAATAACAATCTTCCAAATAATATCCGTCTCAGAGCAACA
TTTTTCATGAACCTTAGGCCATCTGCAGGGATTCAGGAGTTGGCTAATAT
GCTGAAGAAAGGTTCTAAAGCAAAATGGGGCAACCAAATTGGTTATTTAA
TTTTTCCCTTCACCATTGCATTAAGAGATGACCCATTAGATTACCTTCGA
GAAGCAAAAGTAGCAATGGATAGGAAGAAAGCTTCTCTGGAGGCCAGTTT
CTCATATTTTTTATCCAAATCCTTT
back to top