CX043706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 9.755e-70 Identity = 135/192 (70.31%), Postives = 156/192 (81.25%), Query Frame = -2 Query: 218 AAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDS--SLLAPGTYYLTEVDSMYRRFYAKKPADATTCENGSLANGH 787 AAKEK P+S+L+ DESYQSRDLEKVSQQ+AKP YDAKVQP+TLIPK+VGNMYT LIH KH++L GKRVV+FSYGSG TATMFSL+L++ PFS+SNI SVM+V GKLK+RHE+ PEKFVE MKLMEHRYGAKDFVT+K+ LLAPGTYYL EVDS+YRRFY KK E+GS+ANGH Sbjct: 276 AAKEKFTPYSSLTLDESYQSRDLEKVSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSGSTATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKDFVTTKEGIIDLLAPGTYYLKEVDSLYRRFYGKKG------EDGSVANGH 461
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = -2 Query: 263 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLS-EGHHPFSLSNILS-VMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 745 +++Y R++EK +K +++ K +PS L+ QVGNMYT L+ +K + EL GKRV LFSYGSGL ++MFSL++S + SL ++S + ++ +L RH+ PE+F + M+ EH + + +L PGT+YL VDS+YRR Y + P Sbjct: 289 EDTYFDREVEKAVMTYSKNMFEEKTKPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQELAGKRVALFSYGSGLASSMFSLRISSDASAKSSLQRLVSNLSHIKPQLDLRHKVSPEEFAQTMETREHNHHKAPYTPEGSIDVLFPGTWYLESVDSLYRRSYKQVP 452
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22 Identity = 63/173 (36.42%), Postives = 94/173 (54.34%), Query Frame = -2 Query: 263 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 772 L F L +E+Y ++D++K + + +++ K + S + GNMYT L+ H+ EL G R+ FSYGSGL A+ FS ++S+ P S L SV ++ +L SR PE+F E+M E Y +F D+S L PGT+YL VD M+RR YA++P Sbjct: 335 LEAFKGLKLEETYTNKDVDKALLKASLDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARRP 507
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.909e-21 Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = -2 Query: 263 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 772 L F L +E+Y ++D++K + + +++ K + S + GNMYT L+ H+ EL G R+ FSYGSGL A+ FS ++S+ P S L SV ++ +L SR PE+F E+M E Y +F D+S L PGT+YL VD M+RR YA+ P Sbjct: 335 LEAFRGLKLEETYTNKDVDKALLKASLDMFNQKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARCP 507
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS2_HUMAN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.374e-21 Identity = 61/173 (35.26%), Postives = 94/173 (54.34%), Query Frame = -2 Query: 263 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 772 L F L +++Y ++DL+K + ++ ++D K + S + GNMYT L+ H+ EL G R+ FSYGSGL A+ FS ++S+ P S + L S ++ +L SR PE+F E+M E Y +F D++ L PGT+YL VD +RR YA++P Sbjct: 335 LEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRP 507
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.094e-20 Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = -2 Query: 269 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLIHN-KHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAK 745 +++Y ++D+EK Q+ + L++ K +PS + GNMYT L+ +L G R+ FSYGSGL A+ +SL++S+ P S L SV ++ +L SR PE+F E+M E Y +F D + L PGT+YL VD +YRR YA+ Sbjct: 344 EDTYANKDIEKAFQKASLDLFNKKTKPSLYLSLHNGNMYTSSLYGCLASLLSQCSAQDLAGSRIGAFSYGSGLAASFYSLRVSQDASPGSPLEKLVSSVSDLPERLASRKRVSPEEFTEIMNQREQYYHKVNFTPPGDPNSLFPGTWYLERVDELYRRKYAR 505
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.866e-20 Identity = 55/173 (31.79%), Postives = 95/173 (54.91%), Query Frame = -2 Query: 269 EKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLIHNKH-SELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSN--ILSVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAK 778 + L L +++Y RD+EK+ +K L++ K +PS ++ QVGNMYT L+ ++ EL GK + +FSYGSG A+MFSL +S P S + + ++ ++ +++ R + P +F +M++ E + + + L PGT+YL +DSM+RR Y + Sbjct: 282 QDLQQLRNLKFEDTYFDRDIEKIFMDKSKQLFEKKTKPSLMLANQVGNMYTTSLYGGLVSLLISEDIGELAGKCICMFSYGSGFAASMFSLHISTDSSPGSTLSRLVTNLTHIKPQVQQRVKLSPGEFENIMEIREQNHHKAPYTPVASPNTLFPGTWYLESIDSMHRRKYKR 454
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.156e-20 Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = -2 Query: 263 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 772 L F L +++Y ++D++K + + +++ K + S + GNMYT L+ H+ +L G R+ FSYGSGL A+ FS ++S+ P S L S ++ +L SR PE+F E+M E Y +F D + L PGT+YL VD +YRR YA++P Sbjct: 335 LEAFRGLKLEDTYTNKDVDKAFLKASLNMFNKKTKNSLYLSTYNGNMYTSSLYGCLASLLAHHSAQDLAGSRIGAFSYGSGLAASFFSFRVSQDASPGSPLEKLVSSTSDLQKRLASRKRVSPEEFTEIMNQREQYYHKMNFSPPGDKNSLFPGTWYLERVDELYRRKYARRP 507
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.428e-20 Identity = 56/166 (33.73%), Postives = 92/166 (55.42%), Query Frame = -2 Query: 275 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFY 772 L + + +++Y LEK + K Y KV P+TL+ KQ+GN Y L+ K ++L GKRV+ FSYGSGL A+ FS K+ + +++I+ +++ +L R PE F E + L E R+ K++V S +++ + PG++YL+ VD+ R Y Sbjct: 280 LEAYKNVKPEDTYFDSVLEKALSAITKNDYATKVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLVGKRVLTFSYGSGLAASAFSFKVEK-----PINHIVEKVDLKNRLAKRVRVEPEIFTEKLSLRETRHNLKNYVPSDETTNMFPGSFYLSSVDNAGIRKY 440
BLAST of CX043706 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.089e-20 Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = -2 Query: 263 LGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXLIHN-KHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL--SVMNVAGKLKSRHEFPPEKFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 772 L F + +++Y RD+EK + + L+ K + S L+ Q GNMYT ++ +L GKR+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD +RR YA++P Sbjct: 298 LEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRP 470 The following BLAST results are available for this feature:
BLAST of CX043706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043706 ID=CX043706; Name=CX043706; organism=Citrus sinensis; type=EST; length=788bpback to top |