CX043645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: PSD12_DICDI (26S proteasome non-ATPase regulatory subunit 12 OS=Dictyostelium discoideum GN=psmD12 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.565e-27 Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = -1 Query: 403 WNTY----KDEFENETNMLGGSLGAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHK 783 W+T+ K E +++T A EDLR+R+IEHNI V+S YY +I+ RLAELL LS+ E+EK +SD+V +K + AKIDRP GI F D N +LN+WA N+ LLDLVEK+ H + +E M+HK Sbjct: 318 WSTFFELNKPELDSQTVF---KTEPNAWEDLRKRVIEHNIRVISTYYQKISTARLAELLDLSLDESEKFVSDLVSNKTIFAKIDRPAGIATFTTTNDPNKVLNAWANNITSLLDLVEKTNHLVQREFMLHK 445
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: PSD12_PONAB (26S proteasome non-ATPase regulatory subunit 12 OS=Pongo abelii GN=PSMD12 PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 6.575e-26 Identity = 54/107 (50.47%), Postives = 79/107 (73.83%), Query Frame = -1 Query: 406 GAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVH 726 G K +DL+ R++EHNI +++KYY+RIT+KR+A+LL LS+ E+E LS++VV+K + AK+DR GI+ FQ KD N++LN W+ L L+ LV K+ H I KE M+H Sbjct: 347 GEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: PSD12_HUMAN (26S proteasome non-ATPase regulatory subunit 12 OS=Homo sapiens GN=PSMD12 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 6.575e-26 Identity = 54/107 (50.47%), Postives = 79/107 (73.83%), Query Frame = -1 Query: 406 GAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVH 726 G K +DL+ R++EHNI +++KYY+RIT+KR+A+LL LS+ E+E LS++VV+K + AK+DR GI+ FQ KD N++LN W+ L L+ LV K+ H I KE M+H Sbjct: 347 GEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: PSD12_BOVIN (26S proteasome non-ATPase regulatory subunit 12 OS=Bos taurus GN=PSMD12 PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 6.575e-26 Identity = 54/107 (50.47%), Postives = 79/107 (73.83%), Query Frame = -1 Query: 406 GAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVH 726 G K +DL+ R++EHNI +++KYY+RIT+KR+A+LL LS+ E+E LS++VV+K + AK+DR GI+ FQ KD N++LN W+ L L+ LV K+ H I KE M+H Sbjct: 347 GEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: PSD12_MOUSE (26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus GN=Psmd12 PE=2 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 8.587e-26 Identity = 53/107 (49.53%), Postives = 79/107 (73.83%), Query Frame = -1 Query: 406 GAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVH 726 G K +DL+ R++EHNI +++KYY+RIT+KR+A+LL LS+ E+E LS++VV+K + AK+DR G++ FQ KD N++LN W+ L L+ LV K+ H I KE M+H Sbjct: 347 GEKRWKDLKSRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 453
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: RPN5_YEAST (26S proteasome regulatory subunit RPN5 OS=Saccharomyces cerevisiae GN=RPN5 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.676e-21 Identity = 52/124 (41.94%), Postives = 80/124 (64.52%), Query Frame = -1 Query: 406 TYKDEFENETNMLGGSLGAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVH 777 TY+ + GG EDL++R+IEHN+ V+S+YYSRITL RL ELL L+ + E ++SD+V + AK++RP IV F+ K+S+ +LN W+ N+++LL+ +E H I KE ++H Sbjct: 317 TYEPVLNEDDLAFGGEANKHHWEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTETYISDLVNQGIIYAKVNRPAKIVNFEKPKNSSQLLNEWSHNVDELLEHIETIGHLITKEEIMH 440
BLAST of CX043645 vs. ExPASy Swiss-Prot
Match: RPN5_SCHPO (26S proteasome regulatory subunit rpn5 OS=Schizosaccharomyces pombe GN=rpn5a PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.769e-16 Identity = 45/107 (42.06%), Postives = 65/107 (60.75%), Query Frame = -1 Query: 406 GAKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPQGIVCFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVH 726 G K +LR+R+IEHNI VV+ YYSRI RL LL +S E E+ L D++ AKIDRP ++ F+ +++ + LN W N+ +LL +EK I KE M++ Sbjct: 329 GEKRWSELRKRVIEHNIRVVANYYSRIHCSRLGVLLDMSPSETEQFLCDLIAKHHFYAKIDRPAQVISFKKSQNVQEQLNEWGSNITELLGKLEKVRQLIIKEEMMN 435 The following BLAST results are available for this feature:
BLAST of CX043645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043645 ID=CX043645; Name=CX043645; organism=Citrus sinensis; type=EST; length=783bpback to top |