CX043640

Overview
NameCX043640
Unique NameCX043640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11381 contig Csv1_Contig11381:17..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 443.736 bits (1140), Expect = 5.073e-124
Identity = 218/252 (86.51%), Postives = 231/252 (91.67%), Query Frame = 3
Query:   24 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFAD-----GKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENLEHNKKLFERV 764
            V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPE DMI LIHHAINSGITLLDTSD+YGPHTNEILLGKALKGG RERV LATKFGI   D     GKR + GDPAYVRAACEASLKRLDIDCIDLYYQHR+DTRVPIE+T+GELKKLVEEGK+KYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVE EI+PTCRELGIGIVAYSPLGRGF SSGPKL+E  S ED+R+YLPRFQAENLE+NK L+ER+
Sbjct:    8 VPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLPRFQAENLENNKNLYERI 259          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 436.802 bits (1122), Expect = 6.201e-122
Identity = 208/248 (83.87%), Postives = 232/248 (93.55%), Query Frame = 3
Query:   21 AVKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENLEHNKKLFERV 764
            +V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPES+MI LIHHA+++G+T LDTSD+YGPHTNE+LLGKAL+GG+RE+VELATKFG+SFADGKREI GDPAYVR ACE S KRL +DCIDLYYQHRID RVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRD E +I+PTCRELGIGIVAYSPLGRGFFSSG KLV+S S++DFR+++PRFQ ENL+ N ++FERV
Sbjct:    7 SVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQPENLDKNAQIFERV 254          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.966e-52
Identity = 113/241 (46.89%), Postives = 152/241 (63.07%), Query Frame = 3
Query:   60 VSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISF--ADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE---IVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENLEHNKKLFERV 764
            V A G GCMG+ A YGP   E++  A++ HA + G T  D+SD+YG   NE  +G+  K  G R+ + LATKFG       G+  +  +P Y+  A + SLKRL IDCIDLYY HR     PIE  +G LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+E+S +S ++E     ++  CRE  I IV Y+PLGRGF +   K  + F + DFR+  PR+Q EN   N +L  ++
Sbjct:   13 VPAIGFGCMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQKENFYKNLELVTKI 252          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29
Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = 3
Query:  138 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENLEHNKKLFERV 764
            L+  A++ G+  +DT+ IYG   +E L+G+ ++  G+R  + +ATK      DG  E+     ++R+  E SLKRL  D IDLYY H  D + P+    G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  + Y PL  G  +   K  +    +DFR+  P+FQ E   HN K  +++
Sbjct:   41 LVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTG--KFTQDTVFDDFRKDKPQFQGETFIHNLKKVDKL 248          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.341e-28
Identity = 91/251 (36.25%), Postives = 134/251 (53.39%), Query Frame = 3
Query:   51 GLEVSAQGLGCMGMSAFYGPPK--PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMRE--RVELATKFGISFADGKREIRGDPAYVRAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKLVE---SFSKE-DFRQYLPRFQAENLEHNKKLFERV 764
            G +V   G G MG++     PK  P+ +   ++++A++ G    D  + YG   P +N  LL +  +       +V L+ K G+ F     +  G+P +V  + E  +  L     +DL+   R+D  VPIE T+  LK  V+ GKI  +GLSE SA TI+RAHAV PI AV++E+SL+SRD+E   I+  CR+L I I+AYSP  RG  +   K VE    F+K   F +YL RF  +    N    + V
Sbjct:    6 GFKVGPIGFGLMGLT---WKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPD--GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDLKEFAKSFPFLEYLDRFSPDVFAKNLPFLQAV 251          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.767e-27
Identity = 77/229 (33.62%), Postives = 119/229 (51.97%), Query Frame = 3
Query:   39 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 722
            +   G+E S  GLG   +         E   I  I  A++ GITL+DT+  YG   +E ++GKA+K  G R++V LATK  + + + +     + A +    E SLKRL  D IDLY  H  D  VPIE T   +K+L + GKI+ IG+S  S   +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y  L RG  +       +F  +D R + P+FQ
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQ 234          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 86/245 (35.10%), Postives = 131/245 (53.47%), Query Frame = 3
Query:   51 GLEVSAQGLGCMGMSAFYGPPK-PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMR--ERVELATKFGISFADGKREIRGDPAYVRAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENLEHNKKLFER 761
            G +V   GLG MG++  + P + P      L+++A++ G    +  + YG   P  N  LL    +   +  ++V L+ K G  F        GDP  V  + + +L RL     +DL+   R+D +VPIE T+  LK  V+ G+I  +GLSEASA +I+RA A+ PI AV+ E+SL+SRD+E   I+ TC +L I I+AY+P   G  +   K  E    +DF +  P F     + N K+FE+
Sbjct:    6 GFKVGPIGLGLMGLT--WRPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGTDFKT--LAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDL--KDFIKAFP-FLRNMDKFNPKVFEK 243          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24
Identity = 75/242 (30.99%), Postives = 119/242 (49.17%), Query Frame = 3
Query:   24 VKRIKLGSQGLEVSAQGLG--CMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENLEHN 743
            +K+ KLG   L+V   GLG   +G    Y P   E     L+  AI +G+T+LDT+ IYG   +E L+G+ L+   RE V +ATK               P +++ + + SLKRL+ D IDL+Y H  D   P +  +  L ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L +R+ E    P  +E  I  + Y PL  G  +       +F + D R     F+ E  + N
Sbjct:    1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKEN 241          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24
Identity = 79/251 (31.47%), Postives = 127/251 (50.60%), Query Frame = 3
Query:   24 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISFADGKREIRGDP--AYVRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGP--KLVESFSKEDFRQYLPRFQAENLEHNKKLFERV 764
            +++ KLG+  L++S  GLGCM +         ++  ++++  AI  GI  LDT+D+Y    NE ++G A++   R  + LATK G  + DG      DP  AY++ A + SL RL  D IDLY  H       I+ TI   ++L +EG I+Y G+S    + I+       I ++ +++SL+ R  E E +P   E  I +VA  P+ +G  +  P  +  ES  +  +  Y      E L + +K  E V
Sbjct:    1 MRKRKLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQN-RRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPE-EWLPLLEEHQISVVARGPVAKGLLTEKPLDQASESMKQNGYLSY----SFEELTNARKAMEEV 239          
BLAST of CX043640 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23
Identity = 82/230 (35.65%), Postives = 115/230 (50.00%), Query Frame = 3
Query:   39 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN----EILLGK--ALKGGMRERVELATKFGISFAD---GKREIRGDPAY-VRAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHA------VHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVES 680
            LG  GL VS   LG M     +G    E     ++  A+++GI   DT++IYG   N    E ++GK  A  G  RE+V LATK     +D   G  ++RG   Y +R   E SLKRL  D I+LY  H ID R P +      +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+LG+G+VA+SPL  G    G K ++S
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGLL--GGKALKS 229          
The following BLAST results are available for this feature:
BLAST of CX043640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
A115_TOBAC5.073e-12486.51Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE6.201e-12283.87IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO3.966e-5246.89Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU1.621e-2935.71Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
PLR1_SCHPO2.341e-2836.25Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
GS69_BACSU5.767e-2733.62General stress protein 69 OS=Bacillus subtilis GN=... [more]
PLR2_SCHPO2.051e-2435.10Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
IOLS_BACSU2.679e-2430.99Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YQKF_BACSU5.968e-2431.47Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
YRPG_BACSU8.618e-2335.65Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12E03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12E03-I6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043640 ID=CX043640; Name=CX043640; organism=Citrus sinensis; type=EST; length=769bp
GAAGAAAGAAAATGGCGGGGGCAGTGAAGAGAATCAAGCTTGGTTCACAA
GGTCTAGAGGTTTCAGCACAAGGCTTAGGATGCATGGGCATGTCCGCCTT
CTACGGGCCCCCGAAGCCCGAGTCCGACATGATCGCCTTGATCCACCATG
CCATTAACAGTGGCATCACTCTACTTGACACCTCCGATATTTACGGGCCC
CACACCAATGAAATCCTTCTGGGAAAGGCTTTGAAGGGAGGAATGAGGGA
AAGAGTTGAATTGGCTACTAAATTTGGTATCAGCTTTGCGGATGGTAAAA
GGGAAATTCGCGGTGACCCGGCTTATGTGAGAGCTGCATGTGAGGCCAGC
TTGAAGCGTCTGGATATTGATTGTATTGATCTTTATTACCAACATCGCAT
TGATACACGAGTTCCCATTGAAGTCACGATTGGAGAACTCAAGAAACTAG
TTGAAGAGGGTAAGATAAAGTATATAGGTCTGTCCGAGGCTTCTGCCTCA
ACAATTAGACGAGCTCACGCTGTCCATCCAATAACAGCTGTGCAGTTGGA
ATGGTCCTTGTGGTCACGAGATGTGGAGGCAGAGATTGTTCCTACTTGCA
GGGAACTTGGCATTGGAATTGTTGCATACAGTCCTCTAGGACGAGGATTT
TTTTCCTCAGGGCCTAAGTTGGTTGAAAGCTTTTCAAAGGAAGATTTTAG
ACAGTATCTACCGAGGTTCCAAGCTGAAAATTTGGAGCATAACAAAAAGT
TATTTGAGCGTGTTAATGA
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