CX043636

Overview
NameCX043636
Unique NameCX043636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: YIE2_SCHPO (SH3 domain-containing protein PJ696.02 OS=Schizosaccharomyces pombe GN=SPAPJ696.02 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.970e-38
Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = -2
Query:  231 IPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFY-GDPYLTTADILLGTVDRPKAAEPLYAAL 755
            IP +VL  AKGL I+TV KAG L S ++G+GL+VAR  DG+WSAPSA+++ G+G GAQIG EL DF+++L+   AV+TF      +LG   S AAGP+GR  EA   A   G    ++YS +KG F GVSLEG+++  R D N   Y GD  +T   +L G V +P AA+PLY  L
Sbjct:   38 IPPSVLTNAKGLVIMTVLKAGFLFSGRIGSGLIVARLDDGTWSAPSAVMTGGMGVGAQIGSELTDFVIILNSKAAVQTFARLGSITLGGNLSIAAGPLGRNAEAGGGASVGGMAPMFSYSKTKGLFAGVSLEGSVLVERRDANRSLYRGD--ITAKRLLSGQVAQPAAADPLYRVL 211          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: YSC84_YEAST (Protein YSC84 OS=Saccharomyces cerevisiae GN=YSC84 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.008e-36
Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = -2
Query:  228 ERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 764
            ++ IP  VL  AKGLAI+TV KAG L S + G+G++VAR  DG+WSAPSAI   G G G  +G EL DF+ +L+  +AV++F      +LG   S +AGP+GR  EA   A   G    + YS SKG F GVS+EG+ +  R + N +FYGD   T+  IL G V  P AA+PL   LE
Sbjct:   35 DQVIPPYVLKRAKGLAIITVLKAGFLFSGRAGSGVIVARLKDGTWSAPSAIAMAGAGAGGMVGVELTDFVFILNSEEAVRSFSEFGTITLGGNVSVSAGPLGRSAEAAASASTGGVSAVFAYSKSKGLFAGVSVEGSAILERREANRKFYGD-NCTSKMILSGRVKVPPAADPLLRILE 212          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: LSB3_YEAST (LAS seventeen-binding protein 3 OS=Saccharomyces cerevisiae GN=LSB3 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.039e-35
Identity = 82/179 (45.81%), Postives = 108/179 (60.34%), Query Frame = -2
Query:  228 ERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 764
            ++ IP  VL  AKGLAI+T+ KAG L S + G+G++VAR  DG+WSAPSAI   G G G  +G EL DF+ +L+   AVK+F      +LG   S +AGP+GR  EA   A   G    + YS SKG F GVS+EG+ +  R + N +FYGD   T   IL G +  P A +PL+  LE
Sbjct:   35 DQVIPPDVLKRAKGLAIITILKAGFLFSGRAGSGVIVARLKDGTWSAPSAIAMAGAGAGGMVGIELTDFVFILNTQDAVKSFSEFGTITLGGNVSVSAGPLGRSAEAAASASAGGVAAVFAYSKSKGLFAGVSVEGSAIIERREANRKFYGD-NCTAKMILSGRIRPPPAVDPLFRVLE 212          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: LSB3_YEAS7 (LAS seventeen-binding protein 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=LSB3 PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.039e-35
Identity = 82/179 (45.81%), Postives = 108/179 (60.34%), Query Frame = -2
Query:  228 ERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 764
            ++ IP  VL  AKGLAI+T+ KAG L S + G+G++VAR  DG+WSAPSAI   G G G  +G EL DF+ +L+   AVK+F      +LG   S +AGP+GR  EA   A   G    + YS SKG F GVS+EG+ +  R + N +FYGD   T   IL G +  P A +PL+  LE
Sbjct:   35 DQVIPPDVLKRAKGLAIITILKAGFLFSGRAGSGVIVARLKDGTWSAPSAIAMAGAGAGGMVGIELTDFVFILNTQDAVKSFSEFGTITLGGNVSVSAGPLGRSAEAAASASAGGVAAVFAYSKSKGLFAGVSVEGSAIIERREANRKFYGD-NCTAKMILSGRIRPPPAVDPLFRVLE 212          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: SH3Y1_XENLA (SH3 domain-containing YSC84-like protein 1 OS=Xenopus laevis GN=sh3yl1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.322e-34
Identity = 78/184 (42.39%), Postives = 115/184 (62.50%), Query Frame = -2
Query:  228 AESNPERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 779
            + + P++ IP  V+  A+GLA+L+V KAG LV+ + G+G+V+AR   G WSAPSAI   GLG G +IG E+ D +++L+  +AV+ F    + +LG   + A GP+GR LE D+    R S   YTY  S+G F G+SLEG+ +  R +TN +FYG   +   +IL G + RP  A+ LY  L+
Sbjct:   28 SRNGPDKIIPPHVIAKAQGLAVLSVIKAGFLVTARGGSGIVLARLPGGRWSAPSAIGIAGLGGGFEIGIEVSDLVIILNHERAVRAFAKGGNLTLGGNFTVAVGPLGRNLEGDVAI--RSSAAVYTYCKSRGLFAGISLEGSGLIERKETNRKFYGQDDIRAYEILFGEIFRPTEAKELYEILD 209          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: SH3Y1_PONAB (SH3 domain-containing YSC84-like protein 1 OS=Pongo abelii GN=SH3YL1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.322e-34
Identity = 82/184 (44.57%), Postives = 114/184 (61.96%), Query Frame = -2
Query:  228 AESNPERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 779
            + + P++ IP  V+  AKGLAIL+V KAG LV+ + G+G+VVAR  DG WSAPSAI   GLG G +IG E+ D +++L+  +AV+ F    + +LG   + A GP+GR LE ++    R S   +TY  S+G F GVSLEG+ +  R +TN +FY    +   DIL G   RP  AE LY  L+
Sbjct:   28 SRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVVARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNLTVAVGPLGRNLEGNVAL--RNSAAVFTYCKSRGLFAGVSLEGSCLIERKETNRKFYCQD-IRAYDILFGDTPRPAQAEDLYEILD 208          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: SH3Y1_HUMAN (SH3 domain-containing YSC84-like protein 1 OS=Homo sapiens GN=SH3YL1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.322e-34
Identity = 82/184 (44.57%), Postives = 114/184 (61.96%), Query Frame = -2
Query:  228 AESNPERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 779
            + + P++ IP  V+  AKGLAIL+V KAG LV+ + G+G+VVAR  DG WSAPSAI   GLG G +IG E+ D +++L+  +AV+ F    + +LG   + A GP+GR LE ++    R S   +TY  S+G F GVSLEG+ +  R +TN +FY    +   DIL G   RP  AE LY  L+
Sbjct:   28 SRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVVARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNLTVAVGPLGRNLEGNVAL--RSSAAVFTYCKSRGLFAGVSLEGSCLIERKETNRKFYCQD-IRAYDILFGDTPRPAQAEDLYEILD 208          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: SH3Y1_BOVIN (SH3 domain-containing YSC84-like protein 1 OS=Bos taurus GN=SH3YL1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.254e-34
Identity = 79/184 (42.93%), Postives = 115/184 (62.50%), Query Frame = -2
Query:  228 AESNPERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALE 779
            + + P++ IP  V+  AKGLAIL+V KAG LV+ + G+G+V+AR  DG WSAPSAI   GLG G ++G E+ D +++L+  +AV+ F    + +LG   + A GP+GR LE ++    R S   +TY  S+G F G+SLEG+ +  R +TN +FY    +   DIL G + RP  AE LY  L+
Sbjct:   28 SRNGPDKIIPAHVIAKAKGLAILSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFELGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNLTVAVGPLGRNLEGNVSL--RSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQD-IRAYDILFGDITRPAQAEDLYEVLD 208          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: SH3Y1_RAT (SH3 domain-containing YSC84-like protein 1 OS=Rattus norvegicus GN=Sh3yl1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.119e-33
Identity = 79/183 (43.17%), Postives = 114/183 (62.30%), Query Frame = -2
Query:  231 AESNPERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAAL 779
            + + P++ IP  V+  AKGLA+L+V KAG LV+ + G+G+V+AR  DG WSAPSAI   GLG G +IG E+ D +++L+  +AV+ F    + +LG   + A GP+GR LE ++    R S   +TY  S+G F G+SLEG+ +  R +TN +FY    +   DIL G V +P  AE LY  L
Sbjct:   28 SRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNFTVAVGPLGRNLEGNVSL--RSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQD-IRAYDILFGDVPQPAQAEDLYEIL 207          
BLAST of CX043636 vs. ExPASy Swiss-Prot
Match: SH3Y1_MOUSE (SH3 domain-containing YSC84-like protein 1 OS=Mus musculus GN=Sh3yl1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.119e-33
Identity = 79/183 (43.17%), Postives = 114/183 (62.30%), Query Frame = -2
Query:  231 AESNPERSIPLAVLNGAKGLAILTVAKAGVLVSYKLGTGLVVARRSDGSWSAPSAILSVGLGWGAQIGGELMDFIVVLHDSKAVKTFCSRLHFSLGAGCSAAAGPIGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAAL 779
            + + P++ IP  V+  AKGLA+L+V KAG LV+ + G+G+V+AR  DG WSAPSAI   GLG G +IG E+ D +++L+  +AV+ F    + +LG   + A GP+GR LE ++    R S   +TY  S+G F G+SLEG+ +  R +TN +FY    +   DIL G V +P  AE LY  L
Sbjct:   28 SRNGPDKIIPAHVIAKAKGLAVLSVIKAGFLVTARGGSGIVLARLPDGKWSAPSAIGIAGLGGGFEIGIEVSDLVIILNYDRAVEAFAKGGNLTLGGNFTVAVGPLGRNLEGNVSL--RSSAAVFTYCKSRGLFAGISLEGSCLIERKETNRKFYCQD-IRAYDILFGDVPQPAQAEDLYEIL 207          
The following BLAST results are available for this feature:
BLAST of CX043636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
YIE2_SCHPO1.970e-3849.43SH3 domain-containing protein PJ696.02 OS=Schizosa... [more]
YSC84_YEAST7.008e-3646.93Protein YSC84 OS=Saccharomyces cerevisiae GN=YSC84... [more]
LSB3_YEAST2.039e-3545.81LAS seventeen-binding protein 3 OS=Saccharomyces c... [more]
LSB3_YEAS72.039e-3545.81LAS seventeen-binding protein 3 OS=Saccharomyces c... [more]
SH3Y1_XENLA1.322e-3442.39SH3 domain-containing YSC84-like protein 1 OS=Xeno... [more]
SH3Y1_PONAB1.322e-3444.57SH3 domain-containing YSC84-like protein 1 OS=Pong... [more]
SH3Y1_HUMAN1.322e-3444.57SH3 domain-containing YSC84-like protein 1 OS=Homo... [more]
SH3Y1_BOVIN2.254e-3442.93SH3 domain-containing YSC84-like protein 1 OS=Bos ... [more]
SH3Y1_RAT1.119e-3343.17SH3 domain-containing YSC84-like protein 1 OS=Ratt... [more]
SH3Y1_MOUSE1.119e-3343.17SH3 domain-containing YSC84-like protein 1 OS=Mus ... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_12E01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12E01-I2-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043636 ID=CX043636; Name=CX043636; organism=Citrus sinensis; type=EST; length=786bp
CAACTTTAATTCATCCCTTTAAACTGTTCCTTTGTACAAATATAATGTGA
GTCACCCCATGAATTTTTGTTCTATGATTACATATTGCAGAAGAGAAATA
AATTTTAGGATTAAGCGTTTCTCTACATACAAAGCCTCACCAGGTAGTGA
TGGATATGTGGCTTCACATGCAGCAGAGATATGCCACAAAGCAATGAGGA
CTAGTGGCTTAGACTGGAATAAAGTCCTTCAAGCGCAGCATACAGTGGTT
CAGCCGCCTTTGGCCGGTCCACCGTCCCAAGAAGAATGTCTGCCGTAGTC
AAATAAGGATCCCCATAAAACCGTAGATTGGTATCCATCCTTGTCGCAAC
AATGTTCCCTTCCAGTGACACTCCAACGAAAGCCCCTTTGCTACAACTGT
AAGTATAGCACATGCCAGAACCTCTGTCTCCAGCACGAAGATCTGCTTCC
AGCACTCTCCCAATAGGCCCTGCTGCAGCACTGCAACCAGCACCAAGAGA
AAAATGCAATCGACTGCAAAACGTTTTTACAGCTTTTGAATCATGGAGCA
CAACTATGAAGTCCATGAGCTCCCCCCCAATCTGAGCGCCCCATCCTAAA
CCAACTGATAATATAGCTGATGGAGCAGACCAGGAACCATCTGACCTTCT
AGCAACAACCAAACCAGTGCCAAGTTTGTAAGAAACTAGTACACCAGCTT
TAGCAACTGTTAGAATTGCCAGACCCTTGGCCCCATTCAGAACCGCTAAG
GGTATTGATCTCTCAGGATTTGACTCCGCAACCTGG
back to top