CX043630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.676e-69 Identity = 124/154 (80.52%), Postives = 143/154 (92.86%), Query Frame = -1 Query: 297 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYRAPPV 758 R+LL+PL D +D+++L +YLESFYTLRKPVASTINTLAGALYKVF +SPD+AR+EMR ACFDYLSLGG+ S GP+ALLSGLNPRP+SL LHFFAVAIYGVGRLL+PFPSPKRMW+GARLI GASGIIFPIIK+EG+RQMFFPA +PA YRAPP+ Sbjct: 385 RDLLRPLRDLHDSSTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDKARQEMRNACFDYLSLGGICSQGPIALLSGLNPRPISLFLHFFAVAIYGVGRLLIPFPSPKRMWLGARLILGASGIIFPIIKSEGLRQMFFPAIVPAYYRAPPI 538
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34 Identity = 68/147 (46.26%), Postives = 99/147 (67.35%), Query Frame = -1 Query: 318 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPA 758 R LL+PL + +A + + ++SFY +RKP+++T+NTL A +V +S D+A++ MRQ C+DYLS GG ++G +ALL G+NPRP+SL+ H A+ + +G LL PFPSP R+W RL A ++ P +KAEGV QM FP A Sbjct: 359 RRLLQPLSNLGNAQKISQVIKSFYDIRKPMSATVNTLGNAFSQVLVASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHLLSPFPSPLRIWHSLRLFGLAMKMLVPHLKAEGVSQMLFPVNAAA 505
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.132e-34 Identity = 69/151 (45.70%), Postives = 99/151 (65.56%), Query Frame = -1 Query: 306 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYRA 758 R LL+PL + DA + + SFY +RKP+++T+NTL A +V S D+A++ MRQ +DYL GG ++G +ALL G+NPRPLSLV H A+ + +G+LL PFPSP R+W +L A ++ P +KAEGV QM FPA A +++ Sbjct: 360 RRLLQPLSNLGDANKVSEVINSFYDIRKPMSATVNTLGNAFSQVLIGSTDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQLLSPFPSPLRIWHSLKLFGLAMKMLVPNLKAEGVSQMLFPANAAAYHKS 510
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.812e-33 Identity = 68/148 (45.95%), Postives = 101/148 (68.24%), Query Frame = -1 Query: 309 LLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 752 LLKPL + D + ++SFY LRKP+++T+NTL + ++V +S D+A++ MRQ CFDYLS GG ++G +AL+ G+NPRPLSL H F +++ +G+LL PFP+P R+W RL+ + ++ P +KAEG+ QM P T A YR Sbjct: 363 LLKPLGNLGDENKVSEVMKSFYALRKPMSATVNTLGNSFWQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFYHLFVISLSSIGQLLSPFPTPLRVWHSLRLLDLSLKMLVPHLKAEGIGQMLSP-TNAAAYR 509
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.875e-30 Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = -1 Query: 309 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 758 R LL+PL + +DA + ++SFY +RKP+++T+NTL A +V +S D+A++ MRQ CFDYLS GG ++G +ALL G+NPRPLSL+ H + + +G+LL PFPSP +W RL AEGV QM PA A YR Sbjct: 360 RRLLQPLRNLSDANKVSEVIKSFYVIRKPMSATVNTLGNAFSQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIFHLCGITLSSIGQLLSPFPSPLGIWHSLRLFG-----------AEGVSQMLSPA-YAAAYR 497
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.876e-29 Identity = 62/150 (41.33%), Postives = 97/150 (64.67%), Query Frame = -1 Query: 309 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 758 RNLLKPL + ++ + ++SFY +RKP+++T+NTLA +V ++ D+AR+ MRQ CF+YL+ G + G + +L G+NP PL+LVLH A+ + +G LL PFPSP+R W R+++ A ++ + EG ++M P T A YR Sbjct: 359 RNLLKPLPNLSNTKKVSDLVKSFYIIRKPMSATVNTLASIFSQVLVATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIP-TNAAAYR 507
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.646e-18 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = -1 Query: 357 RNLLKPLHDFNDAASLGRYLESFYTLRKPVAS-TINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 758 R LLK + D D A++ + +SF+ RK S +N LA ALY++FS++ D R ++R+ACF Y LGG TGPV LLS L+P PL L+ HFF+VA+Y P P+ ++ ++ A IIFP+I +E Sbjct: 431 RQLLKDIPDLYDDAAIFQAKKSFFWSRKRSHSFVVNVLAQALYELFSATDDSLR-QLRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFFSVAVYATYFCFKSEPWATKPRALFSSGAILYKACSIIFPLIYSE 567
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.646e-18 Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = -1 Query: 357 RNLLKPLHDFNDAASLGRYLESFYTLRKPVAS-TINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 758 R LLK + D D A++ +SFY RK S +N LA ALY++FS++ D ++R+ACF Y LGG GPV LLS L+P PL+L+ HFFAVAIY V P P+ + + ++ A +IFP+I +E Sbjct: 432 RKLLKGIPDLYDDAAIFEANKSFYWARKTSHSFVVNILAQALYELFSATDDSLH-QLRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFFAVAIYAVYFCFKSEPWITKPRALLSSSAVLYKACSVIFPLIYSE 568
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.667e-18 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = -1 Query: 357 RNLLKPLHDFNDAASLGRYLESFYTLRKPVAS-TINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 758 R LLK + D D A++ + +SF+ RK S +N LA ALY++FS++ D ++R+ACF Y LGG TGPV LLS L+P PL L+ HFF+VAIY P P+ ++ ++ A I+FP+I +E Sbjct: 430 RQLLKDIPDLYDDAAIFQAKKSFFWSRKRTHSFVVNVLAQALYELFSATDDSLH-QLRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFFSVAIYATYFCFKSEPWATKPRALFSSGAVLYKACSILFPLIYSE 566
BLAST of CX043630 vs. ExPASy Swiss-Prot
Match: ERG1_CANAL (Squalene monooxygenase OS=Candida albicans GN=ERG1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 435 KPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGV-----GRLLLPFP 746 K + DF+D + + L++F+ RK + + INTL+ +LY +F++ R +R CF Y GG GP+ LLSG+ P P+ L HFF+VA Y V R LL FP Sbjct: 362 KFVEDFDDHQLIAKRLKTFHRKRKNLDAVINTLSISLYSLFAADKKPLRI-LRNGCFKYFQRGGECVNGPIGLLSGMLPFPMLLFNHFFSVAFYSVYLNFIERGLLGFP 469 The following BLAST results are available for this feature:
BLAST of CX043630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043630 ID=CX043630; Name=CX043630; organism=Citrus sinensis; type=EST; length=758bpback to top |