CX043629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.618e-76 Identity = 136/162 (83.95%), Postives = 152/162 (93.83%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQEPRAYAPLTIVCDGCFSNLRRSLCKPKVDV 859 LA+TL DGRRVHVIERD+TE DRIVGELLQPGGYLKL+ELGLEDCV EIDAQ+V GYAL+ DGK+TRLSYPLEKFH+DV+GRSFHNGRF+QRMREKAASLPNVR+EQGTVTSL+E+ G++KGVQYKTKDGQE A+APLTIVCDGCFSNLRRSLC PKV+V Sbjct: 89 LAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKTKDGQELSAFAPLTIVCDGCFSNLRRSLCNPKVEV 250
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.474e-53 Identity = 102/157 (64.97%), Postives = 124/157 (78.98%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK--FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQEPRAYAPLTIVCDGCFSNLRRSL 838 LA+ L KDGRRVHVIERD+ EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G ++KDGK S+P++ F D S RSFHNGRF+QR+R+KA+SLPNVRLE+GTV SL+EE G IKGV YK G+E A APLT+VCDGC+SNLRRSL Sbjct: 60 LAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTVVCDGCYSNLRRSL 216
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.315e-53 Identity = 100/156 (64.10%), Postives = 124/156 (79.49%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE-KFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQEPRAYAPLTIVCDGCFSNLRRSL 838 LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+EEIDAQ+ G LFKDGK T +P++ F + SGR FHNGRF+QR+R+KA+SLPNVRLE+GTV SL+EE G +KGV YK G+E ++APLT+VCDGC SNLRRSL Sbjct: 63 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYKNSSGEETTSFAPLTVVCDGCHSNLRRSL 218
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.631e-52 Identity = 98/157 (62.42%), Postives = 124/157 (78.98%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK--FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQEPRAYAPLTIVCDGCFSNLRRSL 838 LA+ L KDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E+IDAQ+ G A++KDGK +P++ F + S RSFHNGRF+Q++R KA SL NVRLE+GTV SLLEE G +KGV YK K+G+E A APLT+VCDGC+SNLRRSL Sbjct: 60 LAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYKNKEGEETTALAPLTVVCDGCYSNLRRSL 216
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.203e-49 Identity = 108/225 (48.00%), Postives = 141/225 (62.67%), Query Frame = 2 Query: 176 HYIAGTLIXXXXXXXXXXXXNDSKKPRKV---STTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQEPRAYAPLTIVCDGCFSNLRRSL 838 H TL+ N KK K+ +T + D V AG GS LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A++KDG+ +S+P + F + +GR+F+NGRF+QR+R+KA+SLP V+LE+GTV SL+EE G IKGV YK G+E A+APLT+VCDGC+SNLRRS+ Sbjct: 7 HVCLWTLLAFVLTWTVFYVNNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSA--------------LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAFAPLTVVCDGCYSNLRRSV 217
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.865e-48 Identity = 94/156 (60.26%), Postives = 118/156 (75.64%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQEPRAYAPLTIVCDGCFSNLRRSL 838 LA+ L KDGRRVHVIERD+ EP R +GEL+Q GG L +LGLEDC+E+IDAQ+ A++KDGK L +P +K F + GR NGR +QR+R+KAASL NV+LE+GTV SL+EE G +KGV YK G+E A+APLT+VCDGC+SNLRRSL Sbjct: 58 LAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSL 213
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.138e-36 Identity = 93/201 (46.27%), Postives = 120/201 (59.70%), Query Frame = 2 Query: 266 TTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF-KDGKS-TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKD-GQEPRAYAPLTIVCDGCFSNLRRSLCKPKVDV 859 T+ +QND V AG GS L L +DGR+V VIERD+ EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + ++ KS ++ YPL + + SGR+FH+GRFI +R+ A + PN + +G V LLEE+ + GVQYK K+ G +APLT+V DG FS R+SL KV V Sbjct: 116 TSTSSQNDPEVIIVGAGVLGSA--------------LVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELHAPLTVVADGLFSKFRKSLVSNKVSV 302
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.793e-36 Identity = 82/165 (49.70%), Postives = 108/165 (65.45%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYAL--FKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKD-GQEPRAYAPLTIVCDGCFSNLRRSLCKPKVDV 859 LA L +DGR+V VIERD+ EPDRIVGELLQPGGY L ELGL D VE ++A + GY + ++ ++ YPL + + SG +FH+GRFI +R+ A + PNV+ +G V LLEE+ + GVQYK K+ G +APLT+V DG FS R+SL KV V Sbjct: 136 LAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGVQYKDKETGDTKELHAPLTVVADGLFSKFRKSLISSKVSV 300
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.694e-33 Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF--KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKD-GQEPRAYAPLTIVCDGCFSNLRRSLCKPKVDV 859 LA L +DGR V VIERD+ EPDRI+GE LQPGGY L ELGL D VE ++A + GY + + ++ YP+ + + SG +FH+G+FI +R+ A + PNV+ +G V LLEE+ + GVQYK K+ G +APLT+V DG FS R++L KV V Sbjct: 137 LATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGVQYKDKETGDTKELHAPLTVVADGLFSKFRKNLISNKVSV 301
BLAST of CX043629 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.870e-31 Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = 2 Query: 374 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLL--EENGTIKGVQYKTKDGQEPRAY-APLTIVCDGCFSNLRRSLCKPKVDV 859 L LG+ GR+V V+ERD++EPDRIVGELLQPGG L ++G+ D VE ID Q GY +F + + YP + G FH GRF+ +R+ S PNV + + TV LL E I GV +K + P Y APLTIVCDGCFS R++ + V Sbjct: 20 LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEVITGVVTSSKKSESPVEYKAPLTIVCDGCFSKFRKAFIDHPIQV 184 The following BLAST results are available for this feature:
BLAST of CX043629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043629 ID=CX043629; Name=CX043629; organism=Citrus sinensis; type=EST; length=860bpback to top |