CX043622

Overview
NameCX043622
Unique NameCX043622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12188 contig Csv1_Contig12188:100..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 8.498e-104
Identity = 187/247 (75.71%), Postives = 212/247 (85.83%), Query Frame = 1 
Query:   97 MDTKIGSLDTCKPPCSDLASPPNGAVSTIQSSV--PATPL----VNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            M+T IGS+D         A+  NGAV    S+V  P T      V+  E++LGRHLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTC+QAVV NLEDAHE IDTA++TAL+ESKPVY+S++CNLP +PHPTFSR+PVPF L+P+LSN+MGLEAA
Sbjct:    1 METHIGSVDGAA------AAADNGAVGCPASAVGCPMTSARPAPVSAGEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAA 241
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 376.711 bits (966), Expect = 8.498e-104
Identity = 187/247 (75.71%), Postives = 212/247 (85.83%), Query Frame = 1 
Query:   97 MDTKIGSLDTCKPPCSDLASPPNGAVSTIQSSV--PATPL----VNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            M+T IGS+D         A+  NGAV    S+V  P T      V+  E++LGRHLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTC+QAVV NLEDAHE IDTA++TAL+ESKPVY+S++CNLP +PHPTFSR+PVPF L+P+LSN+MGLEAA
Sbjct:    1 METHIGSVDGAA------AAADNGAVGCPASAVGCPMTSARPAPVSAGEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAA 241
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.218e-103
Identity = 182/215 (84.65%), Postives = 200/215 (93.02%), Query Frame = 1 
Query:  175 STIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            S IQ S  ++ + N +++TLGRHLARRLV+IG  DVFSVPGDFNLTLLDHLIAEP L  IGCCNELNAGYAADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPN+NDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNL+DAHE ID A+STALKESKPVYIS++CNLPAIPHPTFSR+P+PFSLSP+LSN+ GLEAA
Sbjct:   10 SCIQDSQSSSVIAN-TDATLGRHLARRLVEIGIQDVFSVPGDFNLTLLDHLIAEPRLKNIGCCNELNAGYAADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNTNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLDDAHEQIDRAISTALKESKPVYISISCNLPAIPHPTFSRDPIPFSLSPRLSNKRGLEAA 223
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.218e-103
Identity = 179/221 (81.00%), Postives = 201/221 (90.95%), Query Frame = 1 
Query:  160 PNGAVSTIQSSVPATPLVNPS-ESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            PNG+     S+  A PL   S + T+GRHLARRLV+IG  DVFSVPGDFNLTLLDHLIAEP LNL+GCCNELNAGYAADGY R++GVGACVVTFTVGGLS+LNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQEL+CFQT+TC+QAVVNNL+DAHELIDTA+STALKESKPVYIS+ CNLPAIPHPTF+R+PVPF L+P++SN+ GLEAA
Sbjct:    8 PNGSTPCPTSAPSAIPLRPSSCDGTMGRHLARRLVEIGVRDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYGRAKGVGACVVTFTVGGLSILNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELQCFQTITCFQAVVNNLDDAHELIDTAISTALKESKPVYISIGCNLPAIPHPTFARDPVPFFLAPRVSNQAGLEAA 228
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 6.734e-101
Identity = 180/230 (78.26%), Postives = 203/230 (88.26%), Query Frame = 1 
Query:  130 KPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            KP C+ + S P   VS+  ++V   P+ + + +TLGRHLARRLVQIGATDVF+VPGDFNLTLLD+LIAEPGL LIGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQT+TCYQAV+NNL+DAHE IDTA++TAL+ESKPVYISV CNL  + HPTFSREPVP  +SP+LSN+  LE A
Sbjct:   15 KPSCNSVGSLP--VVSS--NAVINPPVTSAAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYA 240
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 6.734e-101
Identity = 180/230 (78.26%), Postives = 203/230 (88.26%), Query Frame = 1 
Query:  130 KPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            KP C+ + S P   VS+  ++V   P+ + + +TLGRHLARRLVQIGATDVF+VPGDFNLTLLD+LIAEPGL LIGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQT+TCYQAV+NNL+DAHE IDTA++TAL+ESKPVYISV CNL  + HPTFSREPVP  +SP+LSN+  LE A
Sbjct:   15 KPSCNSVGSLP--VVSS--NAVIHPPVTSAAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYA 240
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.559e-100
Identity = 175/231 (75.76%), Postives = 202/231 (87.45%), Query Frame = 1 
Query:  130 KPPCSDL-ASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            KP C+ + A P   + + I +   A   + P+ +TLGRHLARRLVQIGA+DVF+VPGDFNLTLLD+LIAEPGL L+GCCNELNAGYAADGYARSRGVGAC VTFTVGGLSVLNAIAGAYSENLP++CIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQT+TCYQA++NNL+DAHE IDTA++TAL+ESKPVYISV+CNL  + HPTFSR+PVP  +SP+LSN+  LE A
Sbjct:   15 KPTCNGVGALPVANSHAIIATPAAAAATLAPAGATLGRHLARRLVQIGASDVFAVPGDFNLTLLDYLIAEPGLTLVGCCNELNAGYAADGYARSRGVGACAVTFTVGGLSVLNAIAGAYSENLPVVCIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAIINNLDDAHEQIDTAIATALRESKPVYISVSCNLAGLSHPTFSRDPVPMFISPRLSNKANLEYA 245
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.834e-98
Identity = 168/207 (81.16%), Postives = 190/207 (91.79%), Query Frame = 1 
Query:  199 ATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            A  + +  ++TLG HLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL ++GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQ +TCYQAVVNNL+DAH+ ID A+STA++ESKPVYISV+CNLPA+PHPTFSR+PVP+ LSP+LSN+  L AA
Sbjct:   15 AVVVPSSGDATLGGHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRVVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPLTCYQAVVNNLDDAHDQIDRAISTAIRESKPVYISVSCNLPAVPHPTFSRDPVPYFLSPRLSNQASLHAA 221
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.834e-98
Identity = 168/207 (81.16%), Postives = 190/207 (91.79%), Query Frame = 1 
Query:  199 ATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            A  + +  ++TLG HLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEPGL ++GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQ +TCYQAVVNNL+DAH+ ID A+STA++ESKPVYISV+CNLPA+PHPTFSR+PVP+ LSP+LSN+  L AA
Sbjct:   15 AVVVPSSGDATLGGHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRVVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPLTCYQAVVNNLDDAHDQIDRAISTAIRESKPVYISVSCNLPAVPHPTFSRDPVPYFLSPRLSNQASLHAA 221
[Close]
BLAST of CX043622 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.114e-74
Identity = 135/145 (93.10%), Postives = 140/145 (96.55%), Query Frame = 1 
Query:  385 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPQLSNEMGLEAA 819
            AADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGL DFSQE RCFQTVTCY+AVVNNLEDAHELIDTAVSTALKESKPVYIS+ CNLP IPHPTFSREPVPF+LSP+LSN MGLEAA
Sbjct:    1 AADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLQDFSQEPRCFQTVTCYRAVVNNLEDAHELIDTAVSTALKESKPVYISIGCNLPGIPHPTFSREPVPFALSPRLSNMMGLEAA 145
The following BLAST results are available for this feature:
BLAST of CX043622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC2_ORYSJ8.498e-10475.71Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_ORYSI8.498e-10475.71Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_TOBAC4.218e-10384.65Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC1_PEA4.218e-10381.00Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC1_ORYSJ6.734e-10178.26Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_ORYSI6.734e-10178.26Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_MAIZE2.559e-10075.76Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC3_ORYSJ1.834e-9881.16Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC3_ORYSI1.834e-9881.16Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC1_TOBAC4.114e-7493.10Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12C12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12C12-E24-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043622 ID=CX043622; Name=CX043622; organism=Citrus sinensis; type=EST; length=821bp
AGAAGTTCAAAAAAAAAAAAAAACATTTCTCAAAGACACTTTTCGGAAAC
ACATTAACAAACGGACAATTCTTCGTCTCCGGCCCTTCAATCAATCATGG
ACACTAAAATTGGATCACTCGACACCTGCAAGCCCCCATGCAGCGACTTA
GCCAGCCCGCCAAACGGTGCCGTTTCAACAATCCAATCCTCCGTTCCCGC
TACTCCACTCGTCAACCCGTCCGAGTCGACCCTCGGCCGCCACCTCGCTC
GCCGGCTCGTCCAAATCGGCGCCACCGACGTCTTCTCGGTCCCCGGCGAC
TTCAACTTGACGCTTCTCGACCACCTGATAGCCGAGCCCGGGCTCAACTT
GATCGGTTGCTGTAACGAGCTGAATGCCGGATACGCTGCCGATGGGTACG
CTCGCTCGCGTGGGGTCGGCGCCTGTGTCGTGACCTTCACCGTTGGTGGG
CTTAGCGTGCTTAACGCTATCGCCGGTGCTTACAGTGAAAATCTGCCGTT
GATTTGCATCGTTGGTGGCCCAAACTCCAATGATTACGGAACCAACAGGA
TCCTTCATCATACCATTGGCTTGCCTGATTTTAGCCAAGAACTCAGATGC
TTTCAGACTGTCACCTGTTATCAGGCTGTGGTGAATAACTTGGAGGATGC
ACATGAGTTGATTGATACGGCAGTATCAACTGCTTTGAAAGAAAGCAAGC
CTGTTTATATCAGCGTTGCTTGTAACTTGCCTGCGATTCCTCATCCTACT
TTTAGCCGAGAGCCCGTTCCATTTTCGCTTTCTCCCCAGTTGAGTAATGA
GATGGGCTTGGAGGCTGCAGT
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