CX043604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.980e-81 Identity = 150/209 (71.77%), Postives = 173/209 (82.78%), Query Frame = -1 Query: 132 SQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLLYVLNLPYFVK 758 SQL SSF S +R+L++P+G+S SP R +P+ R+ F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPFVKAGPLRNT L+VILS+CLT+YG+ASF+EGEPSTAP LTLTGRKK PD LQTADGWAK GISGVIWAYFLLYVL+LPY+VK Sbjct: 10 SQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 2.580e-80 Identity = 152/210 (72.38%), Postives = 171/210 (81.43%), Query Frame = -1 Query: 132 SQLKSSFTSP-VSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLLYVLNLPYFVK 758 SQL+SSF+S +S+ L P+GISG+PF V P+KR F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPFVKAGPLRNT LVVILS+CLTIYGI+SF EGEPS AP LTLTGRKK+PDQLQTADGWAK GISGV WAYFLLYVL+LPYFVK Sbjct: 10 SQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.947e-77 Identity = 148/210 (70.48%), Postives = 168/210 (80.00%), Query Frame = -1 Query: 132 SQLKSSFTSPVSRSLLTPRGISGSPFRVVPS-KRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLLYVLNLPYFVK 758 SQLKS FT+ ++L+ P+GISG R PS +R F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPFVKAGPLRNTE LVVILS+CLT+YGIASF EGEPS AP LTLTGRKK+PDQLQ+ADGWAK G+SGV WA FL+YVL+LPY+ K Sbjct: 10 SQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 7.523e-72 Identity = 132/192 (68.75%), Postives = 155/192 (80.73%), Query Frame = -1 Query: 132 PRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLLYVLNLPYFVK 707 PRG+SG+ R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF GPLRNT + LV ILS+CLT+YG+ASF+EGEPSTAP LTLTGRKKE D+LQTA+GW++ G+SG +WAYFLLYVL+LPYF K Sbjct: 23 PRGMSGASLT-----RRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.755e-28 Identity = 63/150 (42.00%), Postives = 87/150 (58.00%), Query Frame = -1 Query: 162 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLL 611 Q ++P N DPF+G+L TPIT+S LSNLPAYR +SPLLRG+E+G+ HG+ LVGPF K GPLRN+E+ L++I++ CL IYG+ SF+ + +QLQ+A GW + I G +AY L+ Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------EQLQSAKGWRQFTSGWLVGSIGGASFAYILI 138
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.909e-28 Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = -1 Query: 162 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLL 605 I+P +PF+G+L TP+ SS + WYL NLP YR +SPLLRG+E+G+AHG+ ++GPF K GPLRNT++ L++I SI + IYGI +F E + D+LQTA+GW + + G +AY LL Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQTANGWRQLASGFLLGAVGGAGFAYILL 138
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.309e-27 Identity = 57/150 (38.00%), Postives = 91/150 (60.67%), Query Frame = -1 Query: 162 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLL 611 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+VK GPLR++++ L+++ + CL YG+ SF +G S+ D L+T++GW++ + A+FLL Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.372e-27 Identity = 63/156 (40.38%), Postives = 89/156 (57.05%), Query Frame = -1 Query: 144 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLLYVLNLP 611 + I+P N DPF+G+L TP+++S L NLPAYR +SPLLRG+E+G+AHG+ L+GPF K GPLR T++ L++IL+ CL++YG SF+ R D LQTA+GW + + G +AY LL N+P Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.372e-27 Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = -1 Query: 144 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLLYVLNLP 605 IQ N DPF+G+L TP+++S L+NLPAYR +SPLLRG+E+G+AHG+ LVGPF K GPLRNT++ L++IL++CL++YG SF + + D LQT +GW + + G +AY LL N+P Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX043604 vs. ExPASy Swiss-Prot
Match: PSAL_SYNEN (Photosystem I reaction center subunit XI OS=Synechococcus elongatus naegeli GN=psaL PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.145e-26 Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = -1 Query: 162 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVIWAYFLL 611 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+L G+EVG+AHG+ L+GP+VK GPLR++++ L+++ + CL YG+ SF +G S+ D L+T++GW++ + A+FLL Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140 The following BLAST results are available for this feature:
BLAST of CX043604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043604 ID=CX043604; Name=CX043604; organism=Citrus sinensis; type=EST; length=758bpback to top |