CX043511
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.363e-38 Identity = 72/85 (84.71%), Postives = 81/85 (95.29%), Query Frame = -2 Query: 169 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQSPEGGACIPNLCS 423 +ARNYTYSLEVGG+GRK TWEGTPRS+RDSH+KVRDSHDGLIIQRNMALFFSGGD+KELKLRVTGRIWKEQQ+P+ G CI ++CS Sbjct: 224 DARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 308
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.768e-37 Identity = 75/85 (88.24%), Postives = 77/85 (90.59%), Query Frame = -2 Query: 175 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ--SPEGGACIPNL 423 EARNY YSLEVGG GRKL WEGTPRS+RDSH+KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ GGACIPNL Sbjct: 241 EARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQQSGEGGGACIPNL 325
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.276e-36 Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = -2 Query: 169 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQSPEGGACIPNLCS 423 +AR+Y+YSLEVGG+GRKLTWEGTPRSIRDSH+KVRDS+DGLIIQRNMALFFSGGDRKELKLRVTG+IWKEQ SP+ G IPNL S Sbjct: 242 DARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.557e-33 Identity = 73/114 (64.04%), Postives = 86/114 (75.44%), Query Frame = 1 Query: 520 SGQINSNSVLVALLDSHYTXXXXXXXXXXXXQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATEST---QHHTLSSDSVELTS 852 SGQINSNSVLVALLDS YT Q LEDAVG+H+ITIFAP+NEALERDLDPEFKRFLLEPGNLKSLQTLL+ HI+ R+ N+ +E + +HHTL +D V L++ Sbjct: 39 SGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSN 152
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.133e-31 Identity = 72/115 (62.61%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 505 NNATHSGQINSNSVLVALLDSHYTXXXXXXXXXXXXQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATEST---QHHTLSSDSV 840 +N T SGQINSNSVLVALLDS YT Q LEDAVG+H+ITIFAP+NEALERDLDP+FKRFLL+PGNLKSLQTLLL HI+ R+ N+ E++ +H TL D V Sbjct: 31 HNITGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQV 145
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.181e-28 Identity = 68/115 (59.13%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 505 NNATHSGQINSNSVLVALLDSHYTXXXXXXXXXXXXQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELT 849 +N GQINSNSVLVALLDSHYT Q LE+AVGKH+ITIFAP+N+ALER+LDP FK FLLEP NLKSLQ+LL+ HI+ RI + + S H TLS+D + LT Sbjct: 26 DNKPVPGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLT 140
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.720e-28 Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 520 SGQINSNSVLVALLDSHYTXXXXXXXXXXXXQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTS 852 SGQINSNSVLVALLDSHYT Q LE+AVG+H+ITIFAP+N+ALE++LDPEFK FLL+P NLKSLQ+LL+ HI+ RI + ++ H TLS+D + T+ Sbjct: 27 SGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFTN 137
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.414e-27 Identity = 56/71 (78.87%), Postives = 66/71 (92.96%), Query Frame = -2 Query: 211 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 423 EA+ ++YSLEVG +GRKLTW+G PRSIRDSH+KVRDS DGLII RN+AL+FSGGDR+ELKLRVTGRIWKE+ Sbjct: 238 EAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308
BLAST of CX043511 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.758e-26 Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = -2 Query: 211 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 423 EA+ ++YSLEVG + RKLTW+G PRSIRDSH+KVRDS DGLII RN+AL+FSG D++ELKLRVTGRIWKE+ Sbjct: 235 EAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305 The following BLAST results are available for this feature:
BLAST of CX043511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043511 ID=CX043511; Name=CX043511; organism=Citrus sinensis; type=EST; length=868bpback to top |