CX043503

Overview
NameCX043503
Unique NameCX043503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3577 contig Csv1_Contig3577:1..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26
Identity = 67/196 (34.18%), Postives = 113/196 (57.65%), Query Frame = 1
Query:  247 WDVFRMAVERNPNNRMLGQREIV-DGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEI-EKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGV 828
            +DV+R  + ++ ++  LG RE++ DGK G Y W +YK+       + +A+   G+ +  + GI+ +N PEW++   A     L  V LY TLGA A+E+++ HS +S+   E K + ++L + P TT  +KTIVS+  +     ++  +   + +Y   +F +LGE       V    D+CT++YTSG+TG+PKGV
Sbjct:   57 YDVYR--INKDSDSNFLGIRELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLCEGKNVEKIL-SMPGTT--IKTIVSYDPLPQATLDKFKDNENVKLYLLSDFEKLGEQNPAQHEVPSPEDLCTLLYTSGSTGNPKGV 247          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.950e-19
Identity = 65/201 (32.34%), Postives = 102/201 (50.75%), Query Frame = 1
Query:  235 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML--KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKG 825
            + + +DVF+  ++ + N   LG R+        Y W +YK+V DL   + +A+   G +       GI+  N PEW+I  +AC A  +  VPLYDTLGA A+ +I+  + +S+ F ++ +   +L      K T  LK IV       E  E+ +K G+ V S      LG   +      + +D+  I +TSGTTG+PKG
Sbjct:   89 VRTLYDVFQRGIQVSNNGPCLGSRK----PDQPYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKARILLESVENKLTPGLKIIVVMDSYGSELVEQGKKCGVEVISLKAMEGLGRANRRKPKPPEPDDLAVICFTSGTTGNPKG 285          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 69/241 (28.63%), Postives = 113/241 (46.89%), Query Frame = 1
Query:  127 VVEVEKAKEASGGRPSI---GPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAI--RTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVE--EKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG-ENKQFDLPVKKKNDICTIMYTSGTTGDPKG 825
            +++ E+ +++ G R S+   GP   + +  D          + + VFR  +  + N   LG R+        Y W +Y+EV D    + + +    C        G++  N PEWII   AC    +  VPLYDTLG GA+ +II  + +S   V+  +K +  +     K T  LK I+     +   +E  +K G+ + S       G EN Q  +P  + +D+  + +TSGTTG+PKG
Sbjct:   58 LMQSEEVEDSGGARRSVIGSGPQLLTHYYDDA--------RTMYQVFRRGLSISGNGPCLGFRK----PKQPYQWLSYQEVADRAEFLGSGLLQHNCKACTDQFIGVFAQNRPEWIIVELACYTYSMVVVPLYDTLGPGAIRYIINTADISTVIVDKPQKAVLLLEHVERKETPGLKLIILMDPFEEALKERGQKCGVVIKSMQAVEDCGQENHQAPVP-PQPDDLSIVCFTSGTTGNPKG 285          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 50/173 (28.90%), Postives = 87/173 (50.29%), Query Frame = 1
Query:  316 DGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGE--NKQFDLPVKKKNDICTIMYTSGTTGDPKGV 828
            +G  GK+ W +Y    +    +   +   G++ + K GI+  N  EW+I   A        V  Y+TLG  ++ ++  H+ + +AF   + + + L    K  + LKTI+ F  +  E     ++ G+ +Y++DE ++ G+  N +        + + TIMYTSGTTG PKGV
Sbjct:   90 NGNLGKFEWISYNTYLERCEYIQQGLCELGLKPKSKVGIFSKNRLEWLIVHSASFIQSYCVVSFYETLGVESLSYVTEHAEIGLAFCSAETLQKTL-DIAKGVKVLKTIICFDSIDKEHYNIAKELGVTLYTYDEIMKKGKEANGKHKHTPPTPDTLSTIMYTSGTTGPPKGV 261          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 72/247 (29.15%), Postives = 110/247 (44.53%), Query Frame = 1
Query:  142 KAKEASGGRPSIGPVYRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKK---NDICTIMYTSGTTGDPKGV 828
            KAK  S    S    YRS+ + DG  + + PG ++   VF  A  +  + R+LG REI++        GK       G Y W +Y++V+   +   N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG     D     K   +DI  IMYTSG+TG PKGV
Sbjct:   56 KAKPVSSKPDS---AYRSVNSMDGLASVLYPGCDTLDKVFMYAKNKFKDKRLLGTREILNEEDEIQPNGKVFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQTKLKDIVSLVPRLRHIITVDG-KPPTWSEFPK-GVIVHTMAAVQALGVKADVDKKAHSKPLPSDIAVIMYTSGSTGIPKGV 297          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 72/247 (29.15%), Postives = 110/247 (44.53%), Query Frame = 1
Query:  142 KAKEASGGRPSIGPVYRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKK---NDICTIMYTSGTTGDPKGV 828
            KAK  S    S    YRS+ + DG  + + PG ++   VF  A  +  N R+LG REI++        GK       G Y W +Y++V+   +   N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG     +     K   +DI  IMYTSG+TG PKGV
Sbjct:   56 KAKPVSSKPDS---AYRSINSVDGLASVLYPGCDTLDKVFMYAKNKFKNKRLLGTREILNEEDEIQPNGKIFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQTKLKEIVSLVPRLRHIITVDG-KPPTWSEFPK-GVIVHTMAAVQALGVKANVEKKAHSKPLPSDIAVIMYTSGSTGIPKGV 297          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16
Identity = 58/201 (28.86%), Postives = 99/201 (49.25%), Query Frame = 1
Query:  235 MESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML--KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKG 825
            + + +D F+  ++ + N   LG R+        Y W +YKEV +L   + + +   G +   +   G++  N PEW+I  + C +  +  VPLYDTLGA A+ +I+  + +S+ F ++ +  ++L      K T  LK IV       +  E  +K G+ + S      LG   +      +  D+  I +TSGTTG+PKG
Sbjct:   90 VRTMYDGFQRGIQVSNNGPCLGSRK----PNQPYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIMDSYGSDLVERGKKCGVEIISLKALEDLGRVNRVKPKPPEPEDLAIICFTSGTTGNPKG 286          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 1
Query:  187 YRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG-----ENKQFDLPVKKKNDICTIMYTSGTTGDPKGV 828
            YRS+ + DG  + + PG ++   VF  A  +  N R+LG RE+++        GK       G+Y W +Y++V+       N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG     EN+    P+   +DI  IMYTSG+TG PKGV
Sbjct:   68 YRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNIITSKELLQTKLKDIVSLVPRLRHIITVDG-KPPTWSEFPK-GIIVHTMAAVEALGAKASMENQPHSKPL--PSDIAVIMYTSGSTGLPKGV 297          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 1
Query:  187 YRSLFAKDGFPAPI-PGMESCWDVFRMAVERNPNNRMLGQREIVD--------GKA------GKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG-----ENKQFDLPVKKKNDICTIMYTSGTTGDPKGV 828
            YRS+ + DG  + + PG ++   VF  A  +  N R+LG RE+++        GK       G+Y W +Y++V+       N ++  G + +    I+     EW+I  +AC       V LY TLG  A+   +  + V+     ++ +   LK        L+ I++    KP    E  K G+ V++      LG     EN+    P+   +DI  IMYTSG+TG PKGV
Sbjct:   68 YRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNIITSKELLQTKLKDIVSLVPRLRHIITVDG-KPPTWSEFPK-GIIVHTMAAVEALGAKASMENQPHSKPL--PSDIAVIMYTSGSTGLPKGV 297          
BLAST of CX043503 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.208e-16
Identity = 61/201 (30.35%), Postives = 97/201 (48.26%), Query Frame = 1
Query:  238 ESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK--CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML--KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLG-ENKQFDLPVKKKNDICTIMYTSGTTGDPKG 825
            ++ ++VF+  +  + N   LG R+        Y W +YK+V D    + + +   G +       GI+  N PEW+I   AC    +  VPLYDTLGA A+ ++I  + +S+   +  +   ML        T  LKT++       +  +  EK G+ + S  +   LG EN +  +P     D+  I +TSGTTGDPKG
Sbjct:   75 KTLYEVFQRGLAVSDNGPCLGYRK----PNQPYKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVICDTPQKATMLIENVEKDLTPGLKTVILMDPFDDDLMKRGEKCGIEMLSLHDAENLGKENFKKPMP-PNPEDLSVICFTSGTTGDPKG 270          
The following BLAST results are available for this feature:
BLAST of CX043503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
FCSA_DICDI5.551e-2634.18Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
ACSL1_CAVPO2.950e-1932.34Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL6_HUMAN8.035e-1728.63Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapien... [more]
FCSB_DICDI1.049e-1628.90Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]
ACSL3_RAT1.790e-1629.15Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norv... [more]
ACSL3_MOUSE1.790e-1629.15Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculu... [more]
ACSL1_MOUSE2.338e-1628.86Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL3_PONAB3.053e-1629.06Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abeli... [more]
ACSL3_HUMAN3.053e-1629.06Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapien... [more]
ACSL5_RAT5.208e-1630.35Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11E04_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11E04-I7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043503 ID=CX043503; Name=CX043503; organism=Citrus sinensis; type=EST; length=829bp
GGCCCCCCTCAATATTATCGTTATTATTTAAAGCCCGAGAGTCGAAAGAG
CTGAAAATAAATTGAAAGAAAAAAAAAATTAGAAAGAGGAGTTTTTGTGC
GATCGAAGATGAGTAACATGAAATATGTTGTTGAAGTGGAGAAGGCGAAG
GAGGCGAGCGGCGGAAGGCCTTCGATAGGTCCGGTGTATCGGAGTCTTTT
TGCTAAGGATGGATTTCCGGCTCCGATTCCGGGAATGGAGAGTTGTTGGG
ACGTTTTCCGCATGGCGGTGGAGAGAAATCCAAACAATCGGATGCTTGGT
CAACGCGAGATTGTAGATGGAAAGGCTGGTAAATATGTGTGGAAAACTTA
TAAAGAAGTATATGACTTGGTGATCAAAGTTGTAAATGCCATCCGCACTT
GTGGTGTTGAGGAAAGAGGAAAATGTGGTATTTACGGTGTCAATTGCCCA
GAGTGGATTATCGGCATGGAGGCTTGCAATGCTCTCGGCCTCCATTGTGT
CCCTCTGTACGACACTTTAGGTGCTGGTGCTGTGGAGTTTATTATATGCC
ATTCAGGGGTTTCAATTGCTTTTGTAGAGGAAAAAAAGATTCCTGAGATG
CTTAAAACATTTCCCAAGACCACAGAGCATTTAAAAACAATTGTGAGCTT
TAGCAAGGTTAAACCTGAGCAGAGGGAAGAGATTGAGAAGTATGGTTTGG
CTGTATATTCGTGGGATGAATTTTTGCAACTGGGAGAGAATAAACAATTT
GATCTACCTGTGAAAAAGAAAAATGACATCTGTACAATTATGTATACTAG
TGGAACAACTGGTGATCCAAAGGGAGTAA
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