CX043495

Overview
NameCX043495
Unique NameCX043495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6991 contig Csv1_Contig6991:439..1214. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043495 vs. ExPASy Swiss-Prot
Match: SEC14_CANAL (SEC14 cytosolic factor OS=Candida albicans GN=SEC14 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.645e-13
Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 2
Query:    5 KAHKMLVDCLRWRIENDIDNILA------KPIL----PAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKL-SALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKIQVLQGNGRDELLKIMDYASLP 568
            KA  M V C +WR +  ++ IL       KPI+    P   ++  +D + V    Y +E   V  V +   T  +  +   V  +  M +YR    LP+ S+K G  + TS  VLD++G+ + SA N I  +   + I    YPE+   +Y++NAP+ FS  +K+ KP L   T  KI +L  + + ELLK +   +LP
Sbjct:   71 KAIDMFVACEKWREDFGVNTILKDFHYEEKPIVAKMYPTYYHKTDKDGRPV----YFEELGKVDLVKMLKITTQERMLKNLVWEYEAMCQYR----LPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKKELLKQIPPQNLP 261          
BLAST of CX043495 vs. ExPASy Swiss-Prot
Match: SEC14_ASHGO (SEC14 cytosolic factor OS=Ashbya gossypii GN=SEC14 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.052e-12
Identity = 54/198 (27.27%), Postives = 97/198 (48.99%), Query Frame = 2
Query:    8 AHKMLVDCLRWRIENDIDNILA------KPIL----PAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQI-KLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKIQVLQGNGRDELLKIMDYASLP 568
            A  M  +C +WR EN +D I        KP++    P   ++  +D + V +       L  +     ++T ++   N  +  +   + YR    LP++S++    + TS  +LD+ G+ +SA  Q+   +   + I    YPE+   +Y++NAP+ FSA +++ KP L   T  KI +L  + + ELLK +   +LP
Sbjct:   73 ARAMFENCEKWRKENGVDTIFEDFHYEEKPLVAKFYPQYYHKTDKDGRPVYIEELGAVNLTEM---YKITTQERMLKNL-IWEYESFSRYR----LPASSRQADCLVETSCTILDLKGISISAAAQVLSYVREASNIGQNYYPERMGKFYMINAPFGFSAAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 262          
BLAST of CX043495 vs. ExPASy Swiss-Prot
Match: S14L4_HUMAN (SEC14-like protein 4 OS=Homo sapiens GN=SEC14L4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11
Identity = 59/194 (30.41%), Postives = 93/194 (47.94%), Query Frame = 2
Query:    5 KAHKMLVDCLRWRIENDIDNILA-KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSA---SKKHGRYIGTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKIQVLQGNGRDELLKIMDYASLP 568
            K+  ML   + +R + D+DNI+  +P    +LY    DS   G+ GY  EG PV    +G        ++   Q  I+       ++L      ++K GR I  +L V DM GL L  L +  +++     +I + NYPE  +   ++ AP +F   + +VK  + E TRRKI +L  N + EL K +    LP
Sbjct:   51 KSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLY----DSG--GLCGYDYEGCPVYFNIIGSLDPKGLLLSASKQDMIRKRIKVCELLLHECELQTQKLGRKIEMALMVFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSEETRRKIVILGDNWKQELTKFISPDQLP 238          
BLAST of CX043495 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae GN=SEC14 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11
Identity = 54/198 (27.27%), Postives = 96/198 (48.48%), Query Frame = 2
Query:    8 AHKMLVDCLRWRIENDIDNILA------KPIL----PAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLS-ALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKIQVLQGNGRDELLKIMDYASLP 568
            A +M  +C +WR +   D IL       KP++    P   ++  +D + V    Y +E   V    +   T ++  +   V  +  + +YR    LP+ S+  G  + TS  ++D+ G+ +S A + +  +   + I    YPE+   +YI+NAP+ FS  +++ KP L   T  KI +L  + + ELLK +   +LP
Sbjct:   72 AKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPV----YFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYR----LPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 261          
BLAST of CX043495 vs. ExPASy Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica GN=SEC14 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 63/212 (29.72%), Postives = 99/212 (46.70%), Query Frame = 2
Query:    8 AHKMLVDCLRWRIENDIDNILAKPILPAELYRAVRDSQLVGVSGY---SKEGLPVIAVGVG-LSTHDKASVNYYVQSHIQMN---EYRD--RVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIK-LMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKIQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIG 613
            A +M  +C +WR E   + IL         Y+  ++   +    Y    K+G PV    VG ++ H+   +    Q  +  N   EY    R  LP+ S+  G  I TS  +LD+ G+ LS+ +Q+   +   + I    YPE+   +Y++NAP+ FS  + V+K  L   T  KI V   N +++LL  +   +LP    K G  SS  IG
Sbjct:   71 AQEMWENCEKWRKEFGTNTILED-----FWYKEKKEVAKLYPQYYHKTDKDGRPVYVENVGKVNIHEMYKIT--TQERMLRNLVWEYESFVRHRLPACSRVVGHLIETSCTILDLKGVSLSSASQVYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRFLDPVTVSKIHVYGSNYKEKLLAQVPAYNLP---IKFGGQSSSKIG 272          
The following BLAST results are available for this feature:
BLAST of CX043495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SEC14_CANAL1.645e-1331.66SEC14 cytosolic factor OS=Candida albicans GN=SEC1... [more]
SEC14_ASHGO4.052e-1227.27SEC14 cytosolic factor OS=Ashbya gossypii GN=SEC14... [more]
S14L4_HUMAN1.540e-1130.41SEC14-like protein 4 OS=Homo sapiens GN=SEC14L4 PE... [more]
SEC14_YEAST4.480e-1127.27SEC14 cytosolic factor OS=Saccharomyces cerevisiae... [more]
SEC14_YARLI7.642e-1129.72SEC14 cytosolic factor OS=Yarrowia lipolytica GN=S... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11D09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11D09-G17-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043495 ID=CX043495; Name=CX043495; organism=Citrus sinensis; type=EST; length=776bp
CTCAAAAGCCCATAAAATGTTGGTTGATTGTCTGCGCTGGAGGATAGAAA
ATGATATTGACAATATTTTGGCGAAACCAATTCTTCCAGCTGAGTTGTAT
AGAGCAGTGCGAGATTCTCAGCTTGTAGGTGTATCAGGTTACTCAAAAGA
GGGTCTTCCTGTAATTGCTGTTGGTGTTGGGCTAAGCACACATGACAAAG
CTTCTGTGAATTATTATGTACAGTCACACATTCAAATGAATGAATATAGG
GATCGTGTGGTTTTGCCTTCTGCATCCAAAAAGCATGGACGTTACATCGG
CACCAGCCTGAAGGTTTTGGATATGACTGGCTTAAAACTGTCAGCATTGA
ACCAAATAAAGTTGATGACTGTTATAACTACAATCGATGACTTGAACTAT
CCAGAGAAGACTGAAACATACTATATTGTCAATGCCCCGTATATATTTTC
AGCATGTTGGAAGGTCGTAAAGCCACTTCTGCAAGAAAGAACAAGGAGAA
AAATTCAGGTCCTGCAGGGCAACGGGCGTGACGAGTTGCTGAAGATAATG
GATTATGCATCCCTCCCACACTTTTGTCGGAAAGAAGGTTCTGGTTCATC
TCGACATATTGGCAATGGAACTACCGAAAATTGTTTCTCCTTGGACCATG
CCTTCCATCAGCGGCTCTATAATTACATCAAGCAGCAAGCCGTACTTACG
GAGTCTGTTGTACCAATCAGACAGGGTTCTTTTCATGTGGATTTTCCGGA
GCCAGACCCTGAAGGCGCCACGATCA
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