DC900227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: ATB15_ARATH (Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.145e-52 Identity = 96/106 (90.57%), Postives = 103/106 (97.17%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 A++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV Sbjct: 731 AIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 836
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSJ (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. japonica GN=HOX32 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.489e-45 Identity = 83/106 (78.30%), Postives = 97/106 (91.51%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 ++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV Sbjct: 754 SIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSI (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica GN=HOX32 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.489e-45 Identity = 83/106 (78.30%), Postives = 97/106 (91.51%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 ++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV Sbjct: 754 SIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: ATHB8_ARATH (Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana GN=ATHB-8 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.261e-44 Identity = 85/108 (78.70%), Postives = 98/108 (90.74%), Query Frame = 3 Query: 24 AVMCCSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFDDH-GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 AVMCCSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD++ G+K L +EFPQIMQQGF C+ GGIC+SSMGR V+YE+AV WKVLN++E HCICFMF+NWSF+ Sbjct: 726 AVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 2.225e-41 Identity = 76/107 (71.03%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 341 A++CCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK L E P IM+QG AC++GG+C+SS+GR SYE+AVAWKV++ + AHCICFMFINW+F+ Sbjct: 762 AILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCICFMFINWTFL 868
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSI (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 3.213e-40 Identity = 75/107 (70.09%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 341 A++CCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK L E P IM+QG AC++GG+C+SS+GR SYE+AVAWKV++ + AHCI FMFINW+F+ Sbjct: 755 AILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCISFMFINWTFL 861
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: REV_ARATH (Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana GN=REV PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 4.639e-39 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 3 Query: 18 QXAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE----TAHCICFMFINWSFV 341 Q A++CCSLK PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKA+ ++F ++MQQGFACL GIC+S+MGR VSYE+AVAWKV E HC+ F F+NWSFV Sbjct: 731 QDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: HOX33_ORYSJ (Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. japonica GN=HOX33 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.303e-38 Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 A++CCSLK P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP+IMQQGF L GG+C SSMGR SYE+AVAWKVL++++ HC+ FM +NW+F+ Sbjct: 750 AILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: HOX33_ORYSI (Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica GN=HOX33 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 2.303e-38 Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 3 Query: 24 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 A++CCSLK P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP+IMQQGF L GG+C SSMGR SYE+AVAWKVL++++ HC+ FM +NW+F+ Sbjct: 750 AILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855
BLAST of DC900227 vs. ExPASy Swiss-Prot
Match: ATB14_ARATH (Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana GN=ATHB-14 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.007e-38 Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 3 Query: 24 AVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 341 A++CCSLK A PVFTFANQ GLDMLETTLVALQDI L+K D+ GRKAL +EFP+IMQQG+A L G+C SSMGR VSYE+A WKVL ++E+ HC+ FMF+NWSFV Sbjct: 745 AILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV 852 The following BLAST results are available for this feature:
BLAST of DC900227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900227 ID=DC900227; Name=DC900227; organism=Citrus sinensis; type=EST; length=558bpback to top |