CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043425_ssr497 microsatellite CX043425_ssr497:497..508. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7182 contig Csv1_Contig7182:20..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_TOBAC (Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum GN=PYR5-6 PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.180e-83
Identity = 150/191 (78.53%), Postives = 176/191 (92.15%), Query Frame = 1
Query:   79 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVA 651
            +ISAVKFG FKLKSGISSP+YIDLRLIVSYPS+LRQIS+T++ SLP +TKYD+VCGVPYTALPIATC+S ++DVPMLMRRKE+KDYGTA AIEG FK  + CLI+EDLVTSGASVLETA PLRAAGL VTDAVV+IDREQGGRENL ENGI LH+M+KL+EMV++L+EKG++ EETE++V KFLEEN+KVA
Sbjct:    1 DISAVKFGEFKLKSGISSPIYIDLRLIVSYPSILRQISQTLVGSLPSSTKYDVVCGVPYTALPIATCISTAHDVPMLMRRKEVKDYGTAKAIEGAFKPGQACLIVEDLVTSGASVLETAAPLRAAGLTVTDAVVMIDREQGGRENLAENGITLHSMVKLTEMVKILKEKGRVSEETEKMVKKFLEENRKVA 191          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_ARATH (Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 4.486e-83
Identity = 156/206 (75.73%), Postives = 184/206 (89.32%), Query Frame = 1
Query:   46 NSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNL 663
            ++ME+LILQLHEI AVKFGNFKLKSGI SPVYIDLRLIVSYPSLL QIS+T+ISSLP +  +D+VCGVPYTALPIAT VSVSN +PMLMRRKEIKDYGT+ AIEG F+KD+ CLIIEDLVTSGASVLETA PLRA GL V+DAVVLIDR+QGGRENL ENGI+LH+MI L++MVRVL+EKGK++ E E  ++KFLEEN++V+  ++
Sbjct:    2 SAMEALILQLHEIGAVKFGNFKLKSGIFSPVYIDLRLIVSYPSLLTQISQTLISSLPPSATFDVVCGVPYTALPIATVVSVSNGIPMLMRRKEIKDYGTSKAIEGIFEKDQTCLIIEDLVTSGASVLETAAPLRAVGLKVSDAVVLIDRQQGGRENLAENGIKLHSMIMLTDMVRVLKEKGKIEVEVEVNLLKFLEENRRVSVPSV 207          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_PONAB (Uridine 5'-monophosphate synthase OS=Pongo abelii GN=UMPS PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 108/203 (53.20%), Postives = 148/203 (72.91%), Query Frame = 1
Query:   61 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLG 666
            L+  L+++ A KFG+F LKSG+SSP+YIDLR IVS P LL Q++ T+  +       +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT   +EG     E CLIIED+VTSG+SVLETA  L+  GL VTDA+VL+DREQGG++ L+ +GI LH++  LS+M+ +L ++ K+D ET   V +F++EN  VAA++ G
Sbjct:   11 LVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADTLFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETAEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKIDAETVGRVKRFIQENVFVAANHNG 213          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_HUMAN (Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.714e-54
Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 1
Query:   34 AMSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLG 666
            A++  ++  L+  L+++ A KFG+F LKSG+SSP+YIDLR IVS P LL Q++  +  +       +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT   +EG     E CLIIED+VTSG+SVLET   L+  GL VTDA+VL+DREQGG++ L+ +GI LH++  LS+M+ +L ++ K+D ET   V +F++EN  VAA++ G
Sbjct:    2 AVARAALGPLVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKVDAETVGRVKRFIQENVFVAANHNG 213          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_MOUSE (Uridine 5'-monophosphate synthase OS=Mus musculus GN=Umps PE=2 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 2.171e-53
Identity = 105/211 (49.76%), Postives = 150/211 (71.09%), Query Frame = 1
Query:   37 MSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLG 666
            ++S ++  L+ +L+++ A KFG+F LKSG+SSPVYIDLR IVS P LL Q++  +  +       +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT   +EG     + CL+IED+VTSGASVLET   L+  GL VTDA+VL+DREQGG++ L+  GI LHA+  LS+M+ +L+++ K+D +    V +F++EN   AA++ G
Sbjct:    3 VASQALGPLVTELYDVQAFKFGSFVLKSGLSSPVYIDLRGIVSRPRLLSQVADILFQTAKNAGISFDSVCGVPYTALPLATVICSANHIPMLIRRKETKDYGTKRLVEGEINPGQTCLVIEDVVTSGASVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAQGIRLHAVCTLSQMLEILQQQEKIDADMVGRVKRFIQENVFSAANHNG 213          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_BOVIN (Uridine 5'-monophosphate synthase OS=Bos taurus GN=UMPS PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.704e-53
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = 1
Query:   58 SLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAAS 657
            SL+  L+++ A KFGNF LKSG+SSPVYIDLR I+S PS+L Q+++ +  +       +D VCGVPYTALP+AT V  ++++PML+RRKE KDYGT   IEG     + CLIIED+V+SG+SV ETA  L+  GL VTDAVVL+DREQGGR+NL+  GI LH++  LS ++ +L ++ K++ ET   V +F++EN  VAA+
Sbjct:   10 SLVTGLYDVQAFKFGNFVLKSGLSSPVYIDLRGIISRPSILNQVAEMLFQTAENAEINFDTVCGVPYTALPLATIVCSTHEIPMLIRRKEKKDYGTKRLIEGAVNPGDTCLIIEDVVSSGSSVWETAEVLQKEGLKVTDAVVLVDREQGGRDNLQARGIRLHSVCTLSTVLCILEQQKKINAETVERVKRFIQENAFVAAN 210          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_DROME (Uridine 5'-monophosphate synthase OS=Drosophila melanogaster GN=r-l PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 7.723e-51
Identity = 98/202 (48.51%), Postives = 144/202 (71.29%), Query Frame = 1
Query:   34 AMSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLP---FTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFL 630
            A +S+ M +L L+L EI+A KFG+FK+K GI+SPVY DLR+IVSYP +++ +S  ++  +     + K+  VCGVPYTALP+AT VSV    PML+RRKE K YGT   +EG F   + CLI+ED+VTSG+S+L+T   L+  G+VVTDAVV++DREQGG  N+ ++G+ +H++  LS ++  L E G++++ T   V K++
Sbjct:    3 AQNSDKMRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLSAKH--VCGVPYTALPLATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKSTVEAVAKYI 202          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_DICDI (Uridine 5'-monophosphate synthase OS=Dictyostelium discoideum GN=pyr56 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 103/204 (50.49%), Postives = 142/204 (69.61%), Query Frame = 1
Query:   49 SMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYD----LVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKV 648
            +++ L+L+L+EI A+K G FKLKSGI SP+YIDLR+ VS P LL  I++ +   +  +        LVCGVPYTALPIAT +S++N++PM++RRKE K YGT   IEG FK+ +  L++EDLVTSGASVLET   L + GL VTD VVL+DR+QG R+ L++ G  LH++  + E++  L E GKL   T  +V  FL+ N+ V
Sbjct:    2 NIKELVLKLNEIDAIKLGEFKLKSGIISPIYIDLRVTVSSPPLLAAIAEMMYQKVYKSGNAQETPALVCGVPYTALPIATGMSIANNIPMVVRRKEAKAYGTKQLIEGRFKEGDNVLVVEDLVTSGASVLETVRDLNSVGLKVTDVVVLLDRQQGARQALEKQGYRLHSVFTMEELINTLIEAGKLTGRTLELVQSFLDANRNV 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYR5_NAEGR (Uridine 5'-monophosphate synthase OS=Naegleria gruberi GN=UMP PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.083e-36
Identity = 86/206 (41.75%), Postives = 135/206 (65.53%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTI--ISSLPFTTKYD--LVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEI-CLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQ----GGRENLK--ENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEN 639
            + L+L L +I A+KFG F LKSGI SP Y+DLR+I   P +LRQ S  +  + ++   T  +  ++CGVPY+AL  ++C+S++ D+PM++ RKE K YGT   +EG + K+E  C++IED++TSGAS++ETA  L   GL+VTDA+V + REQ     G   LK  E    +H  + ++E+ +VL ++GK+ +E    +++F+  N
Sbjct:   13 KELVLDLIQIGALKFGRFTLKSGIVSPFYVDLRIIG--PKMLRQFSVLLYHVMTVKGLTNMEKRVICGVPYSALTFSSCMSMTYDLPMVICRKERKQYGTGNMVEGIYTKNETNCILIEDVITSGASIVETAEKLENEGLLVTDALVFLTREQLPLTNGMHILKKGEKVYNVHPCLTMTEVTQVLLDEGKMSQEQREDILQFIGTN 216          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRFE_ANASP (Bifunctional enzyme pyrF/pyrE OS=Anabaena sp. (strain PCC 7120) GN=pyrFE PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.114e-36
Identity = 78/192 (40.62%), Postives = 123/192 (64.06%), Query Frame = 1
Query:   37 MSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQIS---KTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEE 603
            +  + +  LILQL++I  + FGNF   SG   P YIDLR I+S P +  Q+    + I+ +L F    D + G+PY +LP AT +++  + PM+  RKE+K +GT   IEGNF+  E+ ++++D++ SG SV+E A  L++AGL V D VV ID EQG ++ L+ NG   HA++ +SE+  VL + G++++E
Sbjct:  282 VKQHPLHDLILQLYDIDCIMFGNFVQASGAVFPYYIDLRKIISNPQVFNQVLSGYENIVKNLTF----DRLAGIPYGSLPTATGLALRLNCPMIFPRKEVKAHGTRRLIEGNFRTGEVVVVVDDILISGKSVMEGADKLKSAGLNVHDIVVFIDHEQGVKDKLQANGYRGHAVLTISEITSVLHQAGRINDE 469          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYR5_TOBAC1.180e-8378.53Uridine 5'-monophosphate synthase (Fragment) OS=Ni... [more]
PYR5_ARATH4.486e-8375.73Uridine 5'-monophosphate synthase OS=Arabidopsis t... [more]
PYR5_PONAB6.750e-5553.20Uridine 5'-monophosphate synthase OS=Pongo abelii ... [more]
PYR5_HUMAN5.714e-5450.47Uridine 5'-monophosphate synthase OS=Homo sapiens ... [more]
PYR5_MOUSE2.171e-5349.76Uridine 5'-monophosphate synthase OS=Mus musculus ... [more]
PYR5_BOVIN3.704e-5353.23Uridine 5'-monophosphate synthase OS=Bos taurus GN... [more]
PYR5_DROME7.723e-5148.51Uridine 5'-monophosphate synthase OS=Drosophila me... [more]
PYR5_DICDI2.247e-5050.49Uridine 5'-monophosphate synthase OS=Dictyostelium... [more]
PYR5_NAEGR1.083e-3641.75Uridine 5'-monophosphate synthase OS=Naegleria gru... [more]
PYRFE_ANASP4.114e-3640.63Bifunctional enzyme pyrF/pyrE OS=Anabaena sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
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