CX043342

Overview
NameCX043342
Unique NameCX043342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12837 contig Csv1_Contig12837:718..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  360 YPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPN-------------------PNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRR 698
            Y I  G D+FISV+NLHRSP+ WD  D F PER+ +   N                   PNE   D+ +LPFGGGPRKCVGD FA  E+ VA+ ML++ F+ ++      VE+ TGATIHT NG+   + +R
Sbjct:  441 YAIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGMWCRLKKR 572          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: C97B3_ARATH (Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CYP97B3 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 58/134 (43.28%), Postives = 79/134 (58.96%), Query Frame = -2
Query:  354 YPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW----------------PLDGPN---PNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRRIK 698
            + + +G DIFISV+NLHRSP+ WD+   F PER+                P   P    PNE   D+ +LPFGGGPRKC+GD FA  E+ VA+AML ++F+ ++      VE+ +GATIH  NG+   + RR K
Sbjct:  447 HKVPKGTDIFISVYNLHRSPYFWDNPHDFEPERFLRTKESNGIEGWAGFDPSRSPGALYPNEIIADFAFLPFGGGPRKCIGDQFALMESTVALAMLFQKFDVELRGTPESVELVSGATIHAKNGMWCKLKRRSK 580          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: C97B1_PEA (Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = -2
Query:  462 YPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPN-------------------PNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVR 698
            Y I  G D+FISV+NLHRSP+ WD  + F PER+ +   N                   PNE   D+ +LPFGGGPRKCVGD FA  E+ VA+    R
Sbjct:  450 YTIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVQNNNEEVEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALVCCYR 547          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: CP4P3_DROME (Probable cytochrome P450 4p3 OS=Drosophila melanogaster GN=Cyp4p3 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = -2
Query:  360 IKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRR 692
            + +G  IF+ V+++HR+P  WD  ++F PER+    P  ++    Y Y+PF  G R C+G  FA  E    +  L+++F     +    +   TG T+ T N + + + RR
Sbjct:  407 LPKGSQIFVHVFDIHRNPEYWDSPEEFRPERFL---PENSQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEIDPKTIVFQTGLTLRTKNQIHVKLVRR 514          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = -2
Query:  345 KYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRRIKPPI 701
            K+ +  G ++FI  +  HR  HI+ D +KF PER+    P  +E    Y +LPF  GPR C+G+ FA  E    V+ L+R +      G   +  T   T+  + GL + +  R  P I
Sbjct:  393 KHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERF---SPENSENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGLWVRLKERDHPLI 508          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = -2
Query:  447 GKYPIKRGEDIFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQ 704
            G   ++ G  I +  W LH  P+IW DDA+ F PERW    PN ++  Q   Y+PFG GPR+C+G   A  E  + +  ++R+F F+
Sbjct:  405 GNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQT--PNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = -2
Query:  366 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQ----MALGAPQVEMTTGATIHTTNGLRMTVT 704
            G Y I  G  + I+ W + RSP  WDDA+KF PER+  DG   +     + YLPFG G R+C GD+FA     + VA L+  F++     M  G   +E+  GAT    N L++  +
Sbjct:  379 GGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFE-DG-TADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVAS 493          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: CP132_MYCTU (Putative cytochrome P450 132 OS=Mycobacterium tuberculosis GN=cyp132 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = -2
Query:  360 IKRGEDIFISVWNLHRSPHIWDDADKFNPERW---PLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRR 692
            I+RG  + I + ++H  P  W D D+F+P R+   P D P          YLPFGGG R C+G  FA  E ++  A++ + F F +A G   VE+    T+   +G+ +   RR
Sbjct:  356 IRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFLRCPTDRPR-------CAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGY-HVELEATLTLRPKHGVHVIGRRR 461          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: CP132_MYCBO (Putative cytochrome P450 132 OS=Mycobacterium bovis GN=cyp132 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = -2
Query:  360 IKRGEDIFISVWNLHRSPHIWDDADKFNPERW---PLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRR 692
            I+RG  + I + ++H  P  W D D+F+P R+   P D P          YLPFGGG R C+G  FA  E ++  A++ + F F +A G   VE+    T+   +G+ +   RR
Sbjct:  356 IRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFLRCPTDRPR-------CAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGY-HVELEATLTLRPKHGVHVIGRRR 461          
BLAST of CX043342 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = -2
Query:  429 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRRFNFQMALGAP 704
            G++ I +   + I++W LH +   WD  D+F PER+ LD    +       YLPFG GPR C+G++ A     + VA L++RF+  +  GAP
Sbjct:  380 GEFTIPKDTHVVINLWALHHNEKEWDQPDRFMPERF-LDATGSHLITPSLSYLPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDVPDGAP 470          
The following BLAST results are available for this feature:
BLAST of CX043342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
C97B2_SOYBN3.221e-2644.70Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
C97B3_ARATH7.935e-2543.28Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CY... [more]
C97B1_PEA6.089e-1744.90Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 P... [more]
CP4P3_DROME1.075e-1330.63Probable cytochrome P450 4p3 OS=Drosophila melanog... [more]
C4AA1_DROME3.127e-1332.77Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
C13A1_CAEEL2.027e-1239.08Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C99A3_ORYSJ4.516e-1237.61Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
CP132_MYCTU5.898e-1234.21Putative cytochrome P450 132 OS=Mycobacterium tube... [more]
CP132_MYCBO5.898e-1234.21Putative cytochrome P450 132 OS=Mycobacterium bovi... [more]
CP17A_PERLE7.703e-1236.96Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10E01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10E01-J2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043342 ID=CX043342; Name=CX043342; organism=Citrus sinensis; type=EST; length=705bp
TTTTTTTTTTTTTTTTTAAGGGAGGATGAAATATTAAAAGCATATCTGCA
TAATCATGTTTCATTATGACAATTCTAAACACAATTCTATGATTTAGGCA
TTTAGCCTCTTAATGTAGCAATTGAAGATTTGACAAAGACAGCCTTGTAT
GTTTGTTTTTCTTTTGCCTTTTTCTTCCATTCTTACAACCATCCCCATCA
TATTTCTCATGTTGTATGGCTTCAACATAGCAAGGATATCTATAGTGATT
TGAAATGAGCAGGAAAAATTTCATGCTTATTACCATGAGTTGAGTCTCCA
TTGAAAGAACAGCCGATAGATGCATCTTCTTTCAACACTGGCATTATGGG
AGGTTTTATTCTTCGCGTTACTGTCATTCTTAATCCATTTGTCGTGTGGA
TTGTTGCTCCTGTTGTCATCTCAACTTGAGGAGCCCCAAGTGCCATTTGA
AAGTTAAATCGCCGAACAAGCATCGCAACTGCTACTATGTTCTCAAAGGT
AGCAAACATATCGCCTACGCATTTCCGTGGCCCTCCACCAAATGGTAAGT
AACAGTAATCTTGGTTTGTTTCATTCGGATTAGGTCCATCTAGAGGCCAT
CTTTCGGGATTAAATTTATCTGCATCATCCCAAATATGAGGACTTCGATG
CAGGTTCCACACTGATATAAATATATCTTCTCCCCTTTTTATTGGGTACT
TTCCA
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