CX043307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.078e-63 Identity = 125/172 (72.67%), Postives = 135/172 (78.49%), Query Frame = 1 Query: 223 MKESGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQTASLSSHXXXXXXXXXXXXXXXKLVASQ-TKPIYD----MDLAHYEESMWTC 723 MKES RKQGA SPCAACKLLRRRCAQDCVF+PYFPADEPQKFANVH+VFGASNVNKMLQELP+HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQ QIDVLQ QLALAQAEVVHLRVRQ+ + H K V+ Q K ++ +D A ESMW+C Sbjct: 1 MKESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 4.529e-46 Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQTASLSSH 603 SPCA+CKLLRRRCA+DC+FAPYFP D+P KFA VHKVFGASNV+KMLQELPVHQR DAV+S+V+EANARVRDPVYGCVGAIS LQNQ+ LQ QLA+AQAE++ ++++ +L SH Sbjct: 7 SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.968e-42 Identity = 83/119 (69.75%), Postives = 97/119 (81.51%), Query Frame = 1 Query: 223 MKESGRKQGAP-SPCAACKLLRRRCAQD-CVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLR 573 M++ G + G SPCA CKLLRR+C +D CVFAPYFPA EP KFA VHK+FGASNVNKMLQEL + R DAV SMVYEANAR++DPVYGCVG ISSL Q++ LQTQLA AQAE++H+R Sbjct: 1 MRQKGHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 8.562e-37 Identity = 69/112 (61.61%), Postives = 89/112 (79.46%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQTAS 591 +PCAACKLLRRRCAQ+C F+PYF EP KFA+VHKVFGASNV+KML E+P QR DA +S+VYEAN R+RDPVYGC+GAIS+LQ Q+ LQ +L ++E++ + R+ + Sbjct: 44 TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVA 155
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.118e-36 Identity = 72/112 (64.29%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQTAS 591 SPCAACK LRR+C C+FAPYFP +EP KFANVHK+FGASNV K+L EL HQR DAV+S+ YEA ARVRDPVYGCVGAIS LQ Q+ LQ +L A A++ H + +A+ Sbjct: 10 SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAA 121
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.248e-36 Identity = 71/110 (64.55%), Postives = 86/110 (78.18%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQT 585 SPCAACK+LRRRCA+ CV APYFP +P KF H+VFGASN+ K LQELP QR DAV+SMVYEA AR+RDPVYGC GAI LQ Q+ LQ QLA AQ E+V+++ +++ Sbjct: 32 SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRS 141
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.754e-35 Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQTASL 594 SPCAACK+LRRRCA CV APYFP +P KF H+VFGASN+ K LQELP QR DAV+SMVYEA AR+RDPVYGC GAI LQ Q+ LQ QLA Q E+V +++++++ L Sbjct: 51 SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLL 163
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.698e-35 Identity = 67/115 (58.26%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVRQTASLSS 600 +PCAACKLLRRRCA++C F+PYF EP KFA VHKVFGASNV+KML E+ QRGDA +S+VYEAN R+RDP+YGC+GAIS+LQ+ I LQ++L + E++ + ++ +++S Sbjct: 51 TPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITS 165
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.014e-35 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEV 561 SPCAACK LRR+C +CVFAPYFP D+PQKFANVHKVFGASNV K+L EL QR DAV+S+ YEA+ R+RDPVYGCVG IS LQ+Q+ LQ L+ A++E+ Sbjct: 8 SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.367e-34 Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVV 564 SPCAACK LRR+C DCVFAPYFP +EP KFANVH++FGASNV+K+L E+ HQR DAV+S+ YEA AR++DPVYGCVGAIS LQ Q+ LQ +L A+++ Sbjct: 38 SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLM 140 The following BLAST results are available for this feature:
BLAST of CX043307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043307 ID=CX043307; Name=CX043307; organism=Citrus sinensis; type=EST; length=798bpback to top |