CN186118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186118 vs. ExPASy Swiss-Prot
Match: SYP22_ARATH (Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.022e-34 Identity = 80/136 (58.82%), Postives = 96/136 (70.59%), Query Frame = -3 Query: 377 QRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXEVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSLTC 784 Q+ AAERET YTPFVPQ+ LPSSYTA E+D + EQ A L ES+RQE+VLLD EVNE+FKDLAVLV++QG +IDDIG+HI+NS+ AT+QGKSQLV+AAKTQ+SNSSLTC Sbjct: 118 QQTAAERETTYTPFVPQSALPSSYTAGEVD----KVPEQRAQLQESKRQELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSRAATSQGKSQLVQAAKTQKSNSSLTC 249
BLAST of CN186118 vs. ExPASy Swiss-Prot
Match: SYP23_ARATH (Syntaxin-23 OS=Arabidopsis thaliana GN=SYP23 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.353e-29 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = -3 Query: 416 QRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXEVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVK 784 QRLAAERET Y P V + LPSSYT+ E+D++ D+ EQ ALLVES+RQE+VLLD EV+E+FKDLAVLVH+QG +IDDIG+HI+NS ATAQGKS LV+ Sbjct: 123 QRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDKHPEQRALLVESKRQELVLLDNEIAFNEAVIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGNMIDDIGTHIDNSYAATAQGKSHLVR 245
BLAST of CN186118 vs. ExPASy Swiss-Prot
Match: SYP21_ARATH (Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.669e-27 Identity = 70/136 (51.47%), Postives = 86/136 (63.24%), Query Frame = -3 Query: 377 QRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXEVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSLTC 784 QRLAAERE YTP V + + P+SY A ELD S R ++Q ALL++SRRQEVV LD +VN +FKDLA++V+ QG I+DDI S+++NS AT Q QL KAAKTQRSNSSLTC Sbjct: 126 QRLAAEREITYTPVVTKEI-PTSYNAPELDTESLRISQQQALLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISSNLDNSHAATTQATVQLRKAAKTQRSNSSLTC 260
BLAST of CN186118 vs. ExPASy Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.317e-21 Identity = 65/134 (48.51%), Postives = 79/134 (58.96%), Query Frame = -3 Query: 383 QRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXEVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSL 784 Q + ERET+Y PF P+ S+++ E+DI DRS EQ L+ ESRRQE+VLLD EV E+FKDLAV+V QGTI DDI I+N + A AQGKS LVKA+ TQ SNSSL Sbjct: 209 QHITVERETSYIPFDPKG----SFSSSEVDIGYDRSQEQRVLM-ESRRQEIVLLDNEISLNEARIEAREQGIQEVKHQISEVMEMFKDLAVMVDHQGTI-DDIDEKIDNLRSAAAQGKSHLVKASNTQGSNSSL 336 The following BLAST results are available for this feature:
BLAST of CN186118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186118 ID=CN186118; Name=CN186118; organism=Citrus sinensis; type=EST; length=786bpback to top |