CN186115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186115 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.372e-17 Identity = 54/184 (29.35%), Postives = 100/184 (54.35%), Query Frame = -3 Query: 48 MVDAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKVCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSI-DESEIFGREKEKNELVDRLL 596 M +A L +LE LTS +++ L+ G KE +KL+S I+AVL DA+++Q+K++ + WL +L Y+++D+LGE ++ + + ++ + P F R I ++KEI E LD I++++ F F+ +T +A + E +++GR+KE++E+V L+ Sbjct: 1 MAEAFLQVLLENLTSFI----GDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLKDKAIENWLQKLNSAAYEVDDILGECKNEAIRFE-----QSRLGFYHPGIINF-------RHKIGRRMKEIMEKLDAISEERRKFHFLEKITERQAAAATRETGFVLTEPKVYGRDKEEDEIVKILI 168
BLAST of CN186115 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15 Identity = 59/195 (30.26%), Postives = 101/195 (51.79%), Query Frame = -3 Query: 18 MVDAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNT--ARLKLQIDGVPKKKVCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLL*EGSKEQKGP 596 M +A L +L+ LT E + LV G KE KKL+S +I+AVL DA+++Q+K + ++ WL +L Y+++D+L + T AR K + G + P F K + ++KE+ E LD IA+++ F + +A +R + E +++GREKE++E+V L+ S ++ P Sbjct: 1 MAEAFLQVLLDNLTFFIQGE----LGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYKAIKNWLQKLNVAAYEVDDILDDCKTEAARFKQAVLG-------RYHPRTITFCYK-------VGKRMKEMMEKLDAIAEERRNFHLDERIIERQAARRQTGF-VLTEPKVYGREKEEDEIVKILINNVSYSEEVP 176
BLAST of CN186115 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13 Identity = 49/191 (25.65%), Postives = 98/191 (51.31%), Query Frame = -3 Query: 24 MVDAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKVCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLL*EGSKEQK 596 M +A + +L+ LTS K ++ L+ G E ++L+S I+AVL DA+++Q+ ++ + WL +L Y+++D+L E+ T + + + + P K + R + ++ ++ + L+ IA+++ F + +A R S + E +++GR+KEK+E+V L+ S QK Sbjct: 1 MAEAFIQVVLDNLTSFL----KGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNDKPLENWLQKLNAATYEVDDILDEYKTKATRFL-----QSEYGRYHP-------KVIPFRHKVGKRMDQVMKKLNAIAEERKKFHLQEKIIERQAATRETG-SVLTEPQVYGRDKEKDEIVKILINTASDAQK 174
BLAST of CN186115 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 46/183 (25.14%), Postives = 94/183 (51.37%), Query Frame = -3 Query: 48 MVDAILSPILEQLTSMAVEEAKEQVRLVTGVGKEVKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKVCSFFPTASCFACKPLVLRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLL 596 M +A + +L+ LTS K ++ L+ G E ++L+S I+AVL DA+++Q+ + + WL +L Y+++D+L E+ T + + + + P K + R + ++ ++ + L IA+++ F + +A +R S + E +++GR+KEK+E+V L+ Sbjct: 1 MAEAFIQVLLDNLTSFL----KGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNNKPLENWLQKLNAATYEVDDILDEYKTKATRFS-----QSEYGRYHP-------KVIPFRHKVGKRMDQVMKKLKAIAEERKNFHLHEKIVERQAVRRETG-SVLTEPQVYGRDKEKDEIVKILI 166
BLAST of CN186115 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11 Identity = 44/157 (28.03%), Postives = 84/157 (53.50%), Query Frame = -3 Query: 30 VKKLTSSLRVIEAVLHDAEKRQVKEETVRLWLDQLRCTCYDMEDVLGEWNTARLKLQIDGVPKKKVCSFFPTASCFACKPLV--LRRDIALKIKEINETLDDIAKQKDMFGFVVNVTNERADQRVPSISSIDESEIFGREKEKNELVDRLL*EGSKE 494 +++L+++L I AVL DAE++Q+ V W+++LR Y ED L + T L+L I G + + + +++++ L+ +A Q+++ G + +T QR+P+ S +DESE+FGR+ +K+E++ L+ E K+ Sbjct: 39 LERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIATEALRLNI-GAESSSSNRLRQLRGRMSLGDFLDGNSEHLETRLEKVTIRLERLASQRNILG-LKELTAMIPKQRLPTTSLVDESEVFGRDDDKDEIMRFLIPENGKD 193 The following BLAST results are available for this feature:
BLAST of CN186115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186115 ID=CN186115; Name=CN186115; organism=Citrus sinensis; type=EST; length=766bpback to top |