EG358216

Overview
NameEG358216
Unique NameEG358216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3666 contig Csv1_Contig3666:83..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 2.779e-37
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            TADI GQCPNELR PGGCN PC VFKT+++CCNSG CG T FS+FFK+RCPDAYSYPKDD TS FTCP GTNYKVVFCP
Sbjct:  147 TADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.686e-34
Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            TADI GQCP+EL+  GGCN PC VFKT+++CCNSG CGPT +SRFFK+RCPDAYSYPKDD  S FTC GGT+Y+VVFCP
Sbjct:  124 TADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 237
            TA+I G+CP ELRVPGGCN PC  F  +++CC  G CGPT FS+FFK+RCPDAYSYP+DD TS FTCPGG TNY+V+FCP
Sbjct:  147 TANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 237
            TA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:  139 TANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 237
            TA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:  147 TANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 237
            TA+I G+CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCPGG TNY+VVFCP
Sbjct:  147 TANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.290e-30
Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSG--KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            TA I  QCP +L+  GGCN PC V KT E+CC +G   CGPT  SRFFKERCPDAYSYP+DD TS+FTCP GTNY+VVFCP
Sbjct:  146 TAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.612e-30
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 237
            TA+I G+CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:  147 TANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 3.637e-29
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGK--CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            TADI GQCPN LR PGGCN PC VF+T ++CC +G+  C  T++SRFFK+RCPDAYSYP+DD TS FTC   TNY+VVFCP
Sbjct:  144 TADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCT-NTNYRVVFCP 223          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.079e-28
Identity = 54/81 (66.67%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSG--KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            TA I  QCP +L+  GGCN PC V KT E CC +G   CGPT  SRFFK RCPDAYSYP+DD  S+FTCP GTNY+VVFCP
Sbjct:  146 TAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
The following BLAST results are available for this feature:
BLAST of EG358216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
TLP_ACTDE2.779e-3781.01Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN1.686e-3474.68Protein P21 OS=Glycine max PE=1 SV=1[more]
OSMO_TOBAC5.995e-3270.00Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
TPM1_SOLLC1.131e-3068.75Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OS13_SOLCO1.131e-3068.75Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
NP24_SOLLC1.131e-3067.50Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
PRR1_TOBAC3.290e-3069.14Pathogenesis-related protein R major form OS=Nicot... [more]
OS81_SOLCO5.612e-3066.25Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OSL3_ARATH3.637e-2967.90Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
PRR2_TOBAC3.079e-2866.67Pathogenesis-related protein R minor form OS=Nicot... [more]

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Properties
Property NameValue
Genbank description1e6 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e6, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358216 ID=EG358216; Name=EG358216; organism=Citrus sinensis; type=EST; length=425bp
ACGGCTGATATTGTCGGGCAGTGCCCGAATGAATTGAGGGTTCCCGGAGG
ATGTAATGGGCCATGTCCCGTGTTCAAGACCGAAGAGCACTGTTGCAATT
CAGGCAAATGTGGACCTACAAAATTCTCCAGGTTTTTCAAGGAAAGGTGC
CCGGATGCTTATAGTTACCCTAAAGATGATGCAACAAGCGTCTTCACTTG
TCCTGGTGGGACTAATTATAAGGTTGTGTTCTGCCCGTGAAGATTGAATC
AGCTGCCTATCATTTGTTGGTTGGAATTATCTGCTATACGTTGTAAGGTC
GCTGCAATATATGTGTAAGGAATAAGGCTTTAATTTGCCTTTGTGGCTTC
AAGCCGTGTCACATTAATAAATCTTCTAAAGTAGAGTTTATATAAAGAAA
AAAAAAAAAAAAAAAAAAAAAAAAG
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