EG358215

Overview
NameEG358215
Unique NameEG358215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358215_ssr49 microsatellite EG358215_ssr49:49..60. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EG358215 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.426e-22
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = -1
Query:   73 QYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALL 282
            +YKSILHRG+VNKEKVRISWAVFCE           PETVSE +PAMFPPRTF +HI+HKLFR++Q+ALL
Sbjct:  286 KYKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQEALL 355          
BLAST of EG358215 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = -1
Query:   64 QYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDE 282
            +YKSILHRGLVNKEKVRISWAVFCE           PE VS + PA FPPRTF QHIEHKLF + Q+ L+S++
Sbjct:  282 KYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354          
BLAST of EG358215 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.507e-19
Identity = 46/69 (66.67%), Postives = 51/69 (73.91%), Query Frame = -1
Query:   76 QYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDAL 282
            +YKSILHRGLVNKEKVRISWAVFCE           PETVSE +P  FPPRTF QH++HKLFR+T   L
Sbjct:  288 KYKSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDGDL 356          
BLAST of EG358215 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.599e-17
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = -1
Query:   91 QYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRR 282
            +YKSILHRG+VNKEKVR SWA+FCE           PETV+E +P  FPPRTF QH+ HKLFR+
Sbjct:  286 KYKSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRK 349          
BLAST of EG358215 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.991e-14
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = -1
Query:   61 QYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDEE 282
            +Y S+LHRGLVN+E VRISW VFCE           PE V+E  PA F PRTF+QH++ KLF++ Q      EE
Sbjct:  304 RYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHKAKAEE 377          
The following BLAST results are available for this feature:
BLAST of EG358215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LDOX_MALDO4.426e-2270.00Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH9.229e-2064.38Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PERFR3.507e-1966.67Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_PETHY5.599e-1762.50Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MAIZE1.991e-1451.35Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
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Properties
Property NameValue
Genbank description11h2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0011h2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358215 ID=EG358215; Name=EG358215; organism=Citrus sinensis; type=EST; length=426bp
ACTGTAGTGAAAGCATTCACCGGAAGATTAAACATAATAAGAAATCCGAT
TAATTAATTATTCTTCATCGGAGAGGAGAGCATCCTGCGTCCTCCTAAAC
AGCTTGTGCTCAATGTGCTGTTGAAAGGTGCGAGGAGGGAACATTGCCGG
CTTTTGCTCAGAGACAGTTTCCGGGAGAGGCTTGAGGATAATCTTGTCCT
TCGGTGGCTCACAGAAAACAGCCCATGAGATCCTAACCTTTTCCTTGTTA
ACAAGTCCCCTGTGAAGAATACTCTTGTACTGCTGGAACTCCAATCTCTT
GAAGCCAAGTAATTGAATCTGAGTCTCAAAAGTTGCGAGAGTTGTAAATT
CAATGTTGTTCCAGGCCATTACATAGCCCTGCTGTAGGTATGAGAGAATG
AAGAAACGCAATGTATCTACATTTTG
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