CN186053

Overview
NameCN186053
Unique NameCN186053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 337.806 bits (865), Expect = 3.987e-92
Identity = 166/207 (80.19%), Postives = 181/207 (87.44%), Query Frame = -1
Query:  162 MILAEYTEFTGNFPAIAAQCLQRLPSSNN-KFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDCTN 779
            MILAEYTEFTGNFP+IAAQCLQ+LPSS+N KFTYNCDHHTFNFLVEDGYAYCVVAK+S+SKQISIAFLER++ADFKKRYGGGKA TAIAKSLNKEFGP+MKEHM YI+DHAEEIEKLIKVKAQVSEVKSIMLENIDKA+DRGEN+  L DKTENLR QAQ YKK GTQ+RRK+WYQNMKIK                 VCHGF+CT+
Sbjct:   16 MILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNCTD 222          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 5.414e-73
Identity = 132/205 (64.39%), Postives = 158/205 (77.07%), Query Frame = -1
Query:  165 MILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDCT 779
            +IL EYTEF GNF A+AAQCLQ+LPSSNNKFTYNCD HTFN+LVE+G+ YCVVA ESV +QI +AFLER++ DF KRYGGGKA TA A SLN+EFG  +KEHM+Y +DH +EI KL KVKAQV+EVK +M+ENI+K +DRGE I+ L DKTENLR QAQ ++  GT+IRRKMW++NMKIK                 VC GF CT
Sbjct:   81 VILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKCT 285          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.057e-72
Identity = 131/204 (64.22%), Postives = 156/204 (76.47%), Query Frame = -1
Query:  168 MILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDC 779
            +IL E+T+F GNF +IAAQCLQ+LPSSNNKFTYNCD HTFN+LVEDG+ YCVVA +S  +QI ++FLER++ DF KRYGGGKA TA A SLNKEFG  +KEHM+Y +DH +EI KL KVKAQVSEVK +M+ENI+K +DRGE I+ L DKTENLR QAQ ++  GTQ+RRKMW QNMKIK                 VCHGF C
Sbjct:   16 VILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.333e-71
Identity = 128/205 (62.44%), Postives = 156/205 (76.10%), Query Frame = -1
Query:  165 MILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDCT 779
            +ILAEYTEF GNF ++AAQCLQ+LPSSNNKFTYNCD HTFN+L ++G+ YCVV  ES  +QI +AFLER++ DF KRYGGGKA TA A SLNKEFG  +KEHM+Y  DH EEI KL KVKAQV+EVK +M+ENI+K +DRGE I+ L DKTENLR QAQ ++  GT+++RK+W++NMKIK                 VCHGF CT
Sbjct:   16 VILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKCT 220          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.333e-71
Identity = 129/204 (63.24%), Postives = 157/204 (76.96%), Query Frame = -1
Query:  168 MILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDC 779
            +IL E+T+F GNF +IAAQCLQ+LPSSNNKFTYNCD HTFN+LVE+G+ YCVVA +S  +QI +AFLER++ DF KRYGGGKA TA A SLNKEFG  +KEHM+Y +DH +EI KL KVKAQVSEVK +M+ENI+K +DRGE I+ L DKTENLR QAQ ++  GTQ+RRKMW+QNMKIK                 +C GF+C
Sbjct:   16 VILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNC 219          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.091e-55
Identity = 110/204 (53.92%), Postives = 138/204 (67.65%), Query Frame = -1
Query:  168 MILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDC 779
            +IL E+T+F GNF ++AAQ L+ LPSSNNKFTYNCD HTFN LVE+G+ YCVVA +S  ++I +AFLER++ DF KRYGG KA T  A SLNKEFG  +KEHM+Y +DH +EI  L K KAQVSEVKS+M+ENI+K + RG   + L         Q QA+    TQ++RK W+QNMKIK                 VC GF+C
Sbjct:   16 VILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSS----ESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNC 215          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.600e-54
Identity = 101/225 (44.89%), Postives = 150/225 (66.67%), Query Frame = -1
Query:  162 MILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGG-KADT------------------AIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDCTN 779
            ++LAE+T ++GNF  IA QCLQ+LP++++K+TY+CD HTFNFLV++G+ + VVA ES  + +   FLER++ DFKKRY    K D                   ++A +L++EFGPI+KEHM+Y + H EE+ KL K+KAQ++EVK IM++NI+K +DRGE I+ L DKTENL+ QA ++++ G Q+RRKMW Q++++K                  C GF C++
Sbjct:   16 VVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKCSS 240          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.203e-25
Identity = 60/205 (29.27%), Postives = 109/205 (53.17%), Query Frame = -1
Query:  162 ILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDCTN 776
            ILA++    GNF  +  Q L ++PS NNK TY+  ++ F+++ +D   Y  +  +   +  + +FL  ++  F+  YG  +A TA+  ++N EF  ++   +K+  ++ + ++K+++ +AQV E+K IM+ NID    RGE ++ L DKTENL + +  +K     + R M  +N+K+                  +C GF   N
Sbjct:   14 ILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIKLTIIIIIVSIVFIYIIVSLLCGGFTWPN 216          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.170e-25
Identity = 62/207 (29.95%), Postives = 108/207 (52.17%), Query Frame = -1
Query:  162 ILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEE--IEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKXXXXXXXXXXXXXXXXXVCHGFDCTN 776
            ILA++    GNF  +  Q L ++PS NNK TY+  ++ F+++ +D   Y  +  +   +  +  FL  ++  F+  YG  +A TA+  ++N EF  ++   +K+   H+E   ++K+++ +AQV E+K IM+ NID    RGE ++ L DKTENL + +  +K     + R M  +N+K+                  +C GF   N
Sbjct:   14 ILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIISVVFIYIIVSPLCGGFTWPN 216          
BLAST of CN186053 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.223e-24
Identity = 58/180 (32.22%), Postives = 103/180 (57.22%), Query Frame = -1
Query:  243 ILAEYTEFTGNFPAIAAQCLQRLPSSNNKFTYNCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERMRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEE--IEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKI 776
            ILA++    GNF  +  Q L ++PS NNK TY+  ++ F+++ +D   Y  +  +   +  +  FL  ++  F+  YG  +A TA+  ++N EF  ++   +K+   H+E   ++K+++ +AQV E+K IM+ NID    RGE ++ L DKTENL + +  +K     + R M  +N+K+
Sbjct:   14 ILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKL 189          
The following BLAST results are available for this feature:
BLAST of CN186053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
VA724_ARATH3.987e-9280.19Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA725_ARATH5.414e-7364.39Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA721_ARATH2.057e-7264.22Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA726_ARATH1.333e-7162.44Putative vesicle-associated membrane protein 726 O... [more]
VA722_ARATH1.333e-7163.24Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA723_ARATH5.091e-5553.92Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA727_ARATH9.600e-5444.89Vesicle-associated membrane protein 727 OS=Arabido... [more]
VAMP7_MOUSE4.203e-2529.27Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_BOVIN7.170e-2529.95Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_HUMAN1.223e-2432.22Vesicle-associated membrane protein 7 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002E17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002E17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186053 ID=CN186053; Name=CN186053; organism=Citrus sinensis; type=EST; length=779bp
GCGGTGTAAGTGTTATTTGACATGAACGATGGTACAATACATGATACAAA
TCTCTCTCTCTCTCTCTTTAATTTCAGTGACCGACCAAAACTCCCCTACA
GAACAGAAGCTGTTGAAGAAGCTCAGTTTTGTACATCGTTGTGAGAAATA
AAGAGTCACTAGTTGGTGCAATCGAATCCATGGCAAACAGAAAGCCATAT
TATGAGGACTAGAATTAGCAAGATTCCGAGAACGACTAACTTTATCTTCA
TGTTTTGATACCACATTTTACGCCGGATTTGAGTTCCCGCTTTCTTGTAC
GCCTGGGCCTGCTCACGCAAGTTTTCGGTTTTGTCGGCAAGATTCTGAAT
GTTTTCACCTCTGTCCACAGCCTTGTCGATATTCTCCAACATTATGCTTT
TGACTTCTGAAACTTGAGCCTTTACTTTTATTAGCTTTTCAATCTCTTCG
GCGTGGTCAATGATATATTTCATGTGCTCTTTCATAATTGGCCCAAATTC
CTTGTTAAGACTCTTGGCAATAGCAGTATCTGCTTTACCACCGCCATACC
GTTTCTTAAAGTCTGCTCTCATACGCTCCAAAAAAGCAATAGAGATCTGC
TTGCTAACAGATTCTTTGGCAACAACGCAGTAGGCGTAACCATCTTCAAC
GAGGAAGTTGAAAGTGTGGTGGTCGCAATTGTAAGTGAACTTGTTGTTAG
AAGAAGGCAGCCTCTGCAAGCACTGAGCTGCAATCGCCGGGAAGTTGCCA
GTGAACTCGGTGTACTCCGCCAATATCAT
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