EG358213

Overview
NameEG358213
Unique NameEG358213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EG358213 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12
Identity = 35/129 (27.13%), Postives = 65/129 (50.39%), Query Frame = 3 
Query:    3 LVYCMENAIMNLNPDR--EQMVWLIDFQGWTMGSVSVKVTRETANVLQNHYPERLGLAILYNPPKVFESFWTVVKPFLEPKTYKKVRFAYSNDPQSQKIMEALF---DINKLDSSFGGRNRVGFDYEAF 374
            LVY +E     ++  +  EQ  +++D++ +  G++ +K   E  + L +H PER+G ++  +PP +F   W ++ PFL   T  KVRF  S     ++    L    DI  L+ + GG     ++ + +
Sbjct:  158 LVYWLEQGFSRMDEPKGIEQFCFIVDYKDFGSGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAELLEYVDIENLEQNLGGNLDYNYNIDEY 286
[Close]
BLAST of EG358213 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe GN=SPCC23B6.04c PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11
Identity = 42/125 (33.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:    3 LVYCMENAIMNLNPDREQMVWLIDFQGWTMGS-VSVKVTRETANVLQNHYPERLGLAILYNPPKVFESFWTVVKPFLEPKTYKKVRFAYSNDPQSQKIMEALFDINKLDSSFGGRNRVGFDYEAF 374
            LV+ +E AI  + P  E +  LI+F+  +  S  SV   +E  N+LQ HY ERLG A++ N P     F+ ++ PF++P T +K++F   N+P  + + +     ++LDS+FGG     + +E +
Sbjct:  717 LVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKF---NEPLDRYVPK-----DQLDSNFGGSLHFEYHHEKY 833
The following BLAST results are available for this feature:
BLAST of EG358213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RSC5_DICDI9.751e-1227.13Random slug protein 5 OS=Dictyostelium discoideum ... [more]
YJX4_SCHPO6.320e-1133.60CRAL-TRIO domain-containing protein C23B6.04c OS=S... [more]
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Properties
Property NameValue
Genbank description10d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358213 ID=EG358213; Name=EG358213; organism=Citrus sinensis; type=EST; length=435bp
ACTTGGTGTATTGCATGGAAAATGCTATAATGAATTTGAACCCTGATAGG
GAGCAAATGGTGTGGCTAATTGATTTTCAAGGGTGGACAATGGGGAGTGT
GTCAGTAAAAGTGACTCGGGAAACAGCTAATGTGTTGCAAAATCATTACC
CTGAGAGATTGGGCCTGGCAATCCTCTATAATCCCCCAAAAGTATTCGAA
TCTTTTTGGACGGTGGTGAAACCATTCCTTGAGCCAAAGACATACAAGAA
AGTGAGGTTTGCCTATTCTAATGATCCTCAGAGCCAGAAAATAATGGAAG
CCCTCTTTGATATTAATAAATTGGATTCTTCTTTTGGGGGAAGAAACAGA
GTTGGGTTTGATTATGAAGCATTTGGGCAGCTTATGAGGGCTGATGATAA
GAAAAAGTCTGATTTAATGAACTCCGGGTGCTCAG
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