CN185975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.146e-79 Identity = 148/217 (68.20%), Postives = 178/217 (82.03%), Query Frame = -1 Query: 183 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSTGVVESQPL 833 YL+FVQ A + LL F +Y AK KSGPLKPGVESVEG VK VVGPVY+KYH +P E+LK++D+KVD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV TASGMAKSVY+KYEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLF A+CSEKYN TVV AAEKGY+V+SY+PLVPTERI+K+F+ E++PL Sbjct: 24 YLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.898e-66 Identity = 125/210 (59.52%), Postives = 159/210 (75.71%), Query Frame = -1 Query: 204 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSTG 833 YL+FVQVA I+V++CF +LY YAK SGPLKPGV++VEGTVK V+GPVY+K++ +PFELL F+DRKV+ S+ +L+ VP ++K+ QA++ AQ AP +A +VASEV+ GV TA + K+VY+K EP AKEL SKYEP AEQYAVSAWR LN++PLF AY SEKYNQ+V AE+GY V+ YLPL+PTERIAKVF G Sbjct: 22 YLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQDG 231
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 9.143e-53 Identity = 111/220 (50.45%), Postives = 145/220 (65.91%), Query Frame = -1 Query: 174 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSTGVVESQPLASA 833 YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P +LLKF+DRKV ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS + EP A++LY++YEP AE+ A AW LN++PL A S +YN V A++G V++YLPLVPTER+++VF PLA A Sbjct: 37 YLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.143e-53 Identity = 111/220 (50.45%), Postives = 145/220 (65.91%), Query Frame = -1 Query: 174 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSTGVVESQPLASA 833 YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P +LLKF+DRKV ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS + EP A++LY++YEP AE+ A AW LN++PL A S +YN V A++G V++YLPLVPTER+++VF PLA A Sbjct: 37 YLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45 Identity = 103/190 (54.21%), Postives = 124/190 (65.26%), Query Frame = -1 Query: 210 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFS 779 LY YAK ++GPLKPGV +VE VK VV PVYD++H +P ELLK+ DRKV E LD VP +K+V +QA RSV SEV+ GV+ AK +YSKYEP AEQ AVSAWRKLNQ+PLF AYC+EKYN+ +VS+AEKGY+VS+YLPLVPTE+IAKVFS Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQA-----------RSVVSEVRRDGVS---------------TFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVFS 165
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.164e-45 Identity = 102/207 (49.28%), Postives = 124/207 (59.90%), Query Frame = -1 Query: 213 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVF 833 YL+FV+ A ++ + F LY YAK SGPLKPGV+++E VK VV PVY +P E +KF+D+ VD SVT LD VPPV+KQV AQ S AQ AP + VAS V GV + AK LY+ EPKAEQYAV WR LN++PL Y SEKYN V E+GY+VSSYLPL+PTE+I KVF Sbjct: 12 YLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGV---------------QEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVF 199
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.871e-38 Identity = 84/206 (40.78%), Postives = 120/206 (58.25%), Query Frame = -1 Query: 216 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKV 833 +LEF+QVA ++ CF LY AK +GPLK GVE++E V+ V+ P+Y+K+H +PF+LL F+DRKVD+ ++ VP ++KQ +QAL +VA+EV+ GV T +A+SV KYEPA AE YA + WR LNQ+PLF Y SEKYN V ++ Y + YLP++P E+I+ + Sbjct: 43 HLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVDTTKSIARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDI 226
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.598e-27 Identity = 79/209 (37.80%), Postives = 97/209 (46.41%), Query Frame = -1 Query: 213 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPK--AEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVF 833 +L FV++ATIH+L NLY YAK SGPLK VE VEG V VV PVY K+ +P LL F+D KV E K D PP+ K+V QA A A+S E +T G P A Y+ E K +V W KLNQ A+ S +YN V GY + YLPLVP + I K + Sbjct: 15 HLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGG-----------------PKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAY 206
BLAST of CN185975 vs. ExPASy Swiss-Prot
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.685e-20 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 513 YLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPFELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEV 833 YL FVQ A + + F N+Y +AK KSGPL+PGV+ +EG VKNV P+Y+++ +P LKF+D V SVT +D +PP++K Q +SA + AP ARS+AS + Sbjct: 17 YLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSL 123 The following BLAST results are available for this feature:
BLAST of CN185975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185975 ID=CN185975; Name=CN185975; organism=Citrus sinensis; type=EST; length=833bpback to top |