CN185973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_SYNS3 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) GN=infC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.875e-12 Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = -3 Query: 373 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNKALSQKAQEPPKKKDKQVVDE 663 Y IDQHDY VR+ A++FLK GDKVK V +GRE + +A L+RR D+ E A +++ K RN+ + L P KA K K KD++VV++ Sbjct: 104 YKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAPLVK-----KDKDEEVVNK 196
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3C_EUGGR (Translation initiation factor IF-3, chloroplastic OS=Euglena gracilis PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.875e-12 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = -3 Query: 361 SYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGEL--AIEENKKFRDRNIFIILVPNKALSQKAQEPPKKKDKQVVDEVSTG 666 S+ I QHDY VR+K ARKFL+ G ++KV + KGREN+F I +++RFQND+ ++ A KK R I + +AL A+ ++ K +E G Sbjct: 395 SHKIGQHDYDVRVKQARKFLEGGHRIKVSMEFKGRENQFVEIGRAVMKRFQNDLADMGKADAVPKKLGTRLILNLAPAGEALKVIAERRAERDRKAAAEEEGEG 498
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_SYNSC (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9605) GN=infC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11 Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = -3 Query: 382 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNKALSQKAQEPPKKKDKQV 663 Y IDQHDY VR+ A++FLK GDKVK V +GRE + +A L+RR D+ E A I++ K RN+ + L P K K +E + +K V Sbjct: 104 YKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEEKEQAANKAV 198
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_SYNP2 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=infC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 430 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNKA 663 Y I++HDY VR+ +A++FLK GDKVK + +GRE + N+A +L+ R D+ E+ I++ K RN+ +IL P K+ Sbjct: 99 YKIEEHDYQVRVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNMMMILAPKKS 177
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_MICAN (Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) GN=infC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11 Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 433 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNK 663 Y ID+HDY+VR+ A++FLK GDKVK + +GRE + N+A EL+ R D+ ++A +++ K RN+ ++L P K Sbjct: 99 YKIDEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELLARMAKDLQDVAEVQQAPKKEGRNMMMMLSPKK 176
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_THETN (Translation initiation factor IF-3 OS=Thermoanaerobacter tengcongensis GN=infC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 433 SYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNK 666 S NI+ HD+ V+LK+A KFLKDGDKVKV + +GRE ++A +L++RF ++ E +E+ RN+ +++ P K Sbjct: 101 SPNIEDHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHTSLAEDLLKRFAEELREYGNVEKAPSMDGRNMMMVIAPKK 179
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_SYNY3 (Translation initiation factor IF-3 OS=Synechocystis sp. (strain PCC 6803) GN=infC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3 Query: 433 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVG-ELAIEENKKFRDRNIFIILVPNK 663 Y ID+HDY VR+ A++FLK GDKVK VN +GRE + ++A EL+ R D+ E I++ K RN+ + L P K Sbjct: 99 YKIDEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLAKELLDRMATDLATEADIQQAPKREGRNMMMFLSPKK 176
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3C_CYAME (Translation initiation factor IF-3, chloroplastic OS=Cyanidioschyzon merolae GN=infC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.373e-11 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = -3 Query: 430 SYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNKA 666 SYN+++HDY VRL A KFLK GDKVKV + LKGRE + +A + +FQ DV LA + + RN+ I VP K+ Sbjct: 96 SYNMEEHDYQVRLSQACKFLKAGDKVKVTLMLKGREMQHLELAQNKMAQFQADVSSLAQLAKPPSQEGRNLSAIFVPKKS 175
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_PROMT (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain NATL2A) GN=infC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = -3 Query: 376 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNKA--LSQKAQEPPKKKDKQVVD 663 Y IDQHDY VR+ A +FLK GDKVK V +GRE + +A L++R D+ E A ++++ K RN+ + L P K L ++++ KK + +D Sbjct: 104 YKIDQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMAKDLEEKAEVQQSPKREGRNMIMFLTPRKTPLLKKESEITEPKKALRTID 202
BLAST of CN185973 vs. ExPASy Swiss-Prot
Match: IF3_PROM4 (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9211) GN=infC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11 Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = -3 Query: 382 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVPNKALSQKAQEPPKKKDKQV 663 Y IDQHDY VR+ A +FLK GDKVK V +GRE + N+A L+ R D+ E A +++ K RN+ + L P K P K +K+V Sbjct: 104 YKIDQHDYEVRINQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEQAEVQQTPKREGRNMIMFLTPRKT-------PLIKNEKEV 191 The following BLAST results are available for this feature:
BLAST of CN185973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185973 ID=CN185973; Name=CN185973; organism=Citrus sinensis; type=EST; length=764bpback to top |