CN185954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185954 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23 Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 437 VVVAAASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTGVPTIEVPYDQSNR--GVVDTPKRSNLSRRIASLVRFREKRKERCFDKKNRYSVRKEVA 742 VV +LTLSF+G+VYVF V+PEKVQAVLLLLGGR++P +PT Q+NR G+ TP+R ++ +R+ASL+RFREKRK R FDK RY+VRKEVA Sbjct: 69 VVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVA 172
BLAST of CN185954 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.649e-23 Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 437 VVVAAASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTGVPTIEVPYDQSNR--GVVDTPKRSNLSRRIASLVRFREKRKERCFDKKNRYSVRKEVA 742 VV + + +LTLSF+G+VYVF +V PEKVQAVLLLLGGR++P P Q+NR + TP+R ++ +R+ASLVRFREKRK R FDKK RY+VRKEVA Sbjct: 73 VVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVA 176
BLAST of CN185954 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 464 SELTLSFEGEVYVFPAVTPEKVQAVLLLLGGR-DIPTGVPTIEVPYDQSNRGVVDTPKRSNLSRRIASLVRFREKRKERCFDKKNRYSVRKEVA 742 ++LT+SF G+VYVF AV +KV AVL LLGG ++ G +E+ Q++ VV+ R +L +R SL RFR+KR RCF+KK RY VR+EVA Sbjct: 82 NQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVA 175 The following BLAST results are available for this feature:
BLAST of CN185954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185954 ID=CN185954; Name=CN185954; organism=Citrus sinensis; type=EST; length=742bpback to top |