CN185939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.052e-32 Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = -2 Query: 374 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSK 736 P++L FSVNGSG F G+AEM VD+N W DKW G F V+W +KDVPN+ LRHI LENNENKPVT+SRDTQE+ L++ ++LKI SY TS+ DDF+ YE ++ K + Sbjct: 454 PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 574
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.052e-32 Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = -2 Query: 374 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSK 736 P++L FSVNGSG F G+AEM VD+N W DKW G F V+W +KDVPN+ LRHI LENNENKPVT+SRDTQE+ L++ ++LKI SY TS+ DDF+ YE ++ K + Sbjct: 454 PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 574
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.052e-32 Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = -2 Query: 374 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSK 736 P++L FSVNGSG F G+AEM VD+N W DKW G F V+W +KDVPN+ LRHI LENNENKPVT+SRDTQE+ L++ ++LKI SY TS+ DDF+ YE ++ K + Sbjct: 455 PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 575
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31 Identity = 62/111 (55.86%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 404 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKE 736 P++L FSVNGSG F G+AEM VD+ W DKW G F VKW +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI SY TS+ DDF+ YE ++ Sbjct: 433 PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQ 543
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31 Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 404 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKE 736 P++L FSVNGSG F G+AEM VD+ W DKW G F V+W +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI SY TS+ DDF YE ++ Sbjct: 433 PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQ 543
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.126e-30 Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 404 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKE 736 P++L FSVNGSG F G+AEM VD+N W DKW G F VKW +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI ++ TS+ DDF YE ++ Sbjct: 460 PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQ 570
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.126e-30 Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 404 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKE 736 P++L FSVNGSG F G+AEM VD+N W DKW G F VKW +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI ++ TS+ DDF YE ++ Sbjct: 460 PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQ 570
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.126e-30 Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 404 PIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKE 736 P++L FSVNGSG F G+AEM VD+N W DKW G F VKW +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI ++ TS+ DDF YE ++ Sbjct: 460 PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQ 570
BLAST of CN185939 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17 Identity = 41/104 (39.42%), Postives = 67/104 (64.42%), Query Frame = -2 Query: 428 IFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLD-KWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKT-SLLDD 733 +FLFFS+N SG+F G+AEM+ + + D W+ + K+ F V+W +++D+ N L+ + +NE KP+THSRDTQEI G+ ++ +FK+ + S LD+ Sbjct: 200 VFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFSFLDE 303 The following BLAST results are available for this feature:
BLAST of CN185939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185939 ID=CN185939; Name=CN185939; organism=Citrus sinensis; type=EST; length=773bpback to top |