CN185930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_SIMCH (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Simmondsia chinensis PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.026e-79 Identity = 149/227 (65.64%), Postives = 172/227 (75.77%), Query Frame = 1 Query: 82 AACSPLVPNPAH---NRLTAASSTVRF--RKISAVAAPPKP-------KTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 A S +P H +R+ ASST+ ++I P P KTHSMPP+K+E+FKSLE WA NVL LKPVEKCWQPQDFLPDP F DQV+ LRERT +PD+Y VVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYL+GRVDM IEKT+QYLI +GMDP +ENNPYLGF+YTSFQERATFISHG Sbjct: 15 AVTSSGLPRSYHLRSHRVFMASSTIGITSKEIPNAKKPHMPPREAHVQKTHSMPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFLPDPAS--EGFMDQVKELRERTKEIPDEYLVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIWTRAWTAEENRHGDLLNKYLYLTGRVDMKQIEKTIQYLIGSGMDPRSENNPYLGFIYTSFQERATFISHG 239
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_CUCSA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.646e-79 Identity = 137/178 (76.97%), Postives = 154/178 (86.52%), Query Frame = 1 Query: 193 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 THSMPP+K+E+FKSLE WA N+L LKPVE+CWQPQDFLPD F F +QVR LRER LPD+YFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM +EKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHG Sbjct: 62 THSMPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFLPDSA--FEGFHEQVRELRERAKELPDEYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQVEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHG 237
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_SOLCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum commersonii PE=2 SV=2) HSP 1 Score: 294.664 bits (753), Expect = 3.455e-79 Identity = 148/229 (64.63%), Postives = 168/229 (73.36%), Query Frame = 1 Query: 52 QFLVTSTKPPAACSPLVPNPAHNRLTAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 Q + T+ +P CSPL T +V + +PP+ THSMPPEK E+F SL WA NN+L LKPVEKCWQ DFLPDP F DQV+ LRER +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHG Sbjct: 11 QSIKTTRRP---CSPLRSPRVFMASTLRPPSVEDGNVKKPFSPPREVHVQVTHSMPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFLPDPAS--EGFEDQVKELRERCKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHG 234
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_SOYBN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine max GN=ACPD PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.697e-79 Identity = 141/204 (69.12%), Postives = 161/204 (78.92%), Query Frame = 1 Query: 127 TAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 T S + I PP+ THSMPP+K+E+F+SLE WA N+L LKPVEKCWQPQDFLPDP+ F +QV+ LRER LPDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHG Sbjct: 31 TLRSGSKEVENIKKPFTPPREVHVQVTHSMPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFLPDPSS--DGFEEQVKELRERAKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHG 232
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_RICCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.697e-79 Identity = 136/178 (76.40%), Postives = 153/178 (85.96%), Query Frame = 1 Query: 193 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 THSMPP+K+E+FKSL+ WA N+L LKPVEKCWQPQDFLPDP F +QVR LRER +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHG Sbjct: 62 THSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPAS--DGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHG 237
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_BRANA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.989e-78 Identity = 144/228 (63.16%), Postives = 170/228 (74.56%), Query Frame = 1 Query: 64 TSTKPPAACSPLVPNPAHNRLTAASSTVRFRKISAVAAPPKPKT-------HSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 +S +PP + +P L ++S + +++ ++ P P HSMPP+K+E+FKS+E WA N+L LK VEK WQPQDFLPDP F DQVR LRER LPDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHG Sbjct: 17 SSARPPIST---FRSPKFLCLASSSPALSSKEVESLKKPFTPPKEVHVQVLHSMPPQKIEIFKSMEDWAEQNLLTQLKDVEKSWQPQDFLPDPAS--DGFEDQVRELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHG 239
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_CARTI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.111e-77 Identity = 137/204 (67.16%), Postives = 161/204 (78.92%), Query Frame = 1 Query: 127 TAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 T SST + PP+ THSMPP+K+E+FKS+E WA N+L LKPVEKCWQ QDFLPDP F +QV+ LR R +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS +PWA+W R+WTAEENRHGDLL ++LYLSGRVDM I+KT+QYLI +GMDP TEN+PYLGF+YTSFQERATF+SHG Sbjct: 36 TLGSSTPKVDNAKKPFQPPREVHVQVTHSMPPQKIEIFKSIEGWAEQNILVHLKPVEKCWQAQDFLPDPAS--EGFDEQVKELRARAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAVWTRAWTAEENRHGDLLHTYLYLSGRVDMRQIQKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFVSHG 237
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_ELAGV (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Elaeis guineensis var. tenera PE=2 SV=2) HSP 1 Score: 288.5 bits (737), Expect = 2.476e-77 Identity = 138/209 (66.03%), Postives = 164/209 (78.47%), Query Frame = 1 Query: 121 RLTAASSTVRFRKISAVAAPPKPK-------THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 R++ AS+ K+ P P THSMPP+K+E+FKSLE WA NN+L LKPVEKCWQPQDFLPDP+ F ++V+ LRER+ +PD Y+V LVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WA+W R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHG Sbjct: 28 RISMASTVGPSTKVEIPKKPFMPPREVHVQVTHSMPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFLPDPSS--EGFHEEVKELRERSKEIPDGYYVCLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHG 234
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_ORYSJ (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0379900 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.516e-77 Identity = 139/231 (60.17%), Postives = 173/231 (74.89%), Query Frame = 1 Query: 55 FLVTSTKPPAACSPLVPNPAH--NRLTAASSTV-RFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 F + T P +C + ++ +++ A +ST+ R + PP+ HS+PP+K E+F SL+ WA N+L LLKPVEK WQPQDFLPDP+ F D+V+ LRER +PDDYFV LVGDM+TE+A+PTYQTM+NTLDGVRDETGAS + WA+W R+WTAEENRHGDLL ++YL+GRVDM IEKT+QYLI +GMDPGTENNPYLGF+YTSFQERATFISHG Sbjct: 3 FAASHTASPYSCGGVAQRRSNGMSKMVAMASTINRVKTAKKPYTPPREVHLQVKHSLPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSS--DGFYDEVKELRERAKEIPDDYFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVWTRAWTAEENRHGDLLNKYMYLTGRVDMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHG 231
BLAST of CN185930 vs. ExPASy Swiss-Prot
Match: STAD_GOSHI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 7.204e-77 Identity = 134/182 (73.63%), Postives = 151/182 (82.97%), Query Frame = 1 Query: 181 PKPKTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHG 726 P THSMPP K+E+FKSLE WA NN+L LKPVEKCWQP DFLPDP F +QV+ LRER +PDDYFVVLVGDMITE+A+ TYQTM+NTLDG RDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IE+T+QYLI +GMDP TEN+PY GF+YTSFQERATFISHG Sbjct: 58 PVQITHSMPPHKIEIFKSLEGWAENNILTHLKPVEKCWQPADFLPDPNS--DGFHEQVKELRERAKEIPDDYFVVLVGDMITEEALSTYQTMLNTLDGTRDETGASLTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIERTIQYLIGSGMDPHTENSPYRGFIYTSFQERATFISHG 237 The following BLAST results are available for this feature:
BLAST of CN185930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185930 ID=CN185930; Name=CN185930; organism=Citrus sinensis; type=EST; length=727bpback to top |