CN185805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2A_ARATH (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1 PE=1 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 7.288e-98 Identity = 173/198 (87.37%), Postives = 189/198 (95.45%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 638 MECVFGLVG+GF I+ ADTSAVHSIL+HK+NEDKIMVLDSHKL+AASGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFTRGELATALRK+PY VNIL+AGYD E+G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA++LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR+YAWR+SVKD Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDGARDYAWRQSVKD 198
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2B_ARATH (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2 PE=1 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 2.592e-95 Identity = 169/198 (85.35%), Postives = 183/198 (92.42%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 638 MECVFGLVG+GF I+ ADTSAVHSIL+HK+ EDKIM LDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK+PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA++LVDKCILEIRSRLV+APPNFVIKIVDKDGAREY WR S D Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKDGAREYGWRISTAD 198
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_ORYSJ (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica GN=PBD1 PE=2 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 5.071e-83 Identity = 152/204 (74.51%), Postives = 174/204 (85.29%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 656 MECV G+VG F ++ ADTSAV SILVHK++EDK+MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFTRGELATALRK+PY VN+LLAGYD + G SLYYIDYIAT HK++K AFGYGSYF LS+MD+ + MSVEEAVDLVDKCI EIR RLVVAP NF+IKIVDK+GAREYA R + D+P +A Sbjct: 1 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIKIVDKEGAREYA-RRAYTDSPPEAA 203
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_DICDI (Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45 Identity = 86/191 (45.03%), Postives = 128/191 (67.02%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKET---GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 608 ME + G + +AD+S HSI+ K +EDKI+ +D HKL+ ++GE GDRVQFTE+I KN+ LY RN P++T AAANF R ELAT++R PY +N++LAGYDKE G SLYY+DY+ +L K++ GY SYF L ++DRH +S+E+ ++L+ C E+++R +V+ + +K V +G + Sbjct: 1 METLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLEDGINLMHLCTTELKTRFLVS-GKYTLKFVSSEGIK 190
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_RAT (Proteasome subunit beta type-2 OS=Rattus norvegicus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 85/187 (45.45%), Postives = 126/187 (67.38%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 602 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P F ++++DKDG Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDG 187
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_MOUSE (Proteasome subunit beta type-2 OS=Mus musculus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 85/187 (45.45%), Postives = 126/187 (67.38%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 602 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P F ++++DKDG Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDG 187
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_HUMAN (Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43 Identity = 85/190 (44.74%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P F ++I+DK+G + Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHD 190
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_BOVIN (Proteasome subunit beta type-2 OS=Bos taurus GN=PSMB2 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42 Identity = 84/190 (44.21%), Postives = 128/190 (67.37%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E+AV+L+ KC+ E++ R ++ P F ++I+D++G + Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKCLEELQKRFILNLPTFSVRIIDRNGIHD 190
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_NEUCR (Probable proteasome subunit beta type-2 OS=Neurospora crassa GN=15E6.60 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.441e-39 Identity = 83/188 (44.15%), Postives = 119/188 (63.30%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 602 M + G+ G FTI+ A +A+ + K+++DK L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + PY VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS++D+H H +++ + + L++ C E++ RL + +K V KDG Sbjct: 1 MYVLLGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 188
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_SCHPO (Probable proteasome subunit beta type-2 OS=Schizosaccharomyces pombe GN=SPAC31A2.04c PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.708e-38 Identity = 80/191 (41.88%), Postives = 122/191 (63.87%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 ME + + G F + + +SAV I V K ++DK +L+SH L+ GE GD F E+I N+SLY R+ + L+ A A+FTR +LAT+LR + PY VNILLAGY+ G P L+++DY+AT +V A GY S++ LS+ DR++ ++++EAV ++ C E++ R+ + F+ K+VDKDG RE Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFICKVVDKDGIRE 191 The following BLAST results are available for this feature:
BLAST of CN185805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185805 ID=CN185805; Name=CN185805; organism=Citrus sinensis; type=EST; length=723bpback to top |