CN185793

Overview
NameCN185793
Unique NameCN185793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:210..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 3.513e-45
Identity = 91/133 (68.42%), Postives = 101/133 (75.94%), Query Frame = 2
Query:   62 PLHAEKLTQLRSDVAGLNQINENEKNGFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            P  AEKL  L+S VAGLNQI+ENEK+GFINLV RYLSGE+QH+ WSKIQTPTDE+VVPYD LAP+ EDPAE                    MGCTGPKSV+EVRNGLTFLDLIV  IE LNAK+GC+VPLLLM
Sbjct:    9 PADAEKLNNLKSAVAGLNQISENEKSGFINLVGRYLSGEAQHIDWSKIQTPTDEVVVPYDKLAPLSEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVKQIEALNAKFGCSVPLLLM 141          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.518e-43
Identity = 87/129 (67.44%), Postives = 100/129 (77.52%), Query Frame = 2
Query:   74 EKLTQLRSDVAGLNQINENEKNGFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            ++L+ L+S VAGLNQI+ENEK+GFINLVARYLSGE+QHV WSKIQTPTDE+VVPYD+LAP P+   E                    MGCTGPKSV+EVR+GLTFLDLIVI IENLN+KYG NVPLLLM
Sbjct:    8 DRLSNLKSSVAGLNQISENEKSGFINLVARYLSGEAQHVEWSKIQTPTDEVVVPYDTLAPTPDGSLEIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSNVPLLLM 136          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.804e-41
Identity = 87/126 (69.05%), Postives = 96/126 (76.19%), Query Frame = 2
Query:   86 QLRSDVAGLNQINENEKNGFINLVARYLSGE-SQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            +L+SDVA L+QI+ENEKNGFINLV+RY+SGE +QHV WSKIQTPTDE+VVPYD LAP PEDP E                    MGCTGPKSV+EVRNGLTFLDLIVI IENLN KYG  VPLLLM
Sbjct:   11 KLKSDVASLSQISENEKNGFINLVSRYVSGEEAQHVEWSKIQTPTDEVVVPYDGLAPTPEDPEEIKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGSCVPLLLM 136          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.606e-40
Identity = 83/129 (64.34%), Postives = 96/129 (74.42%), Query Frame = 2
Query:   74 EKLTQLRSDVAGLNQINENEKNGFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            EKL QL+S V GL +++ENEK+GFINLV+RYLSGE+QH+ WSKIQTPTDEIVVPYD +A V ED +E                    MGCTGPKSV+EVR+GLTFLDLIVI IENLN KY C VPL+LM
Sbjct:    7 EKLPQLKSAVDGLTEMSENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVPYDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYNCKVPLVLM 135          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 9.901e-40
Identity = 81/128 (63.28%), Postives = 96/128 (75.00%), Query Frame = 2
Query:   77 KLTQLRSDVAGLNQINENEKNGFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            K+ +L+S VA LNQI+ENEK+GFI+LV+RYLSGE++ + WSKIQTPTDE+VVPYD+L+P PED                       MGCTGPKSV+EVRNG TFLDLIVI IE+LN KYGCNVPLLLM
Sbjct:    5 KIAKLQSAVAELNQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSPPPEDLEATKKLLDKLAVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLM 132          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.881e-39
Identity = 80/129 (62.02%), Postives = 96/129 (74.42%), Query Frame = 2
Query:   74 EKLTQLRSDVAGLNQINENEKNGFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            E L QL+S V GL +++E+EK+GFI+LV+RYLSGE+QH+ WSKIQTPTDEIVVPY+ + PV +D AE                    MGCTGPKSV+EVR+GLTFLDLIVI IENLN KYGC VPL+LM
Sbjct:    6 ENLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLM 134          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.581e-37
Identity = 79/128 (61.72%), Postives = 92/128 (71.88%), Query Frame = 2
Query:   77 KLTQLRSDVAGLNQINENEKNGFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            K+  LR  VA L +I+ENEK GFI+LV+RYLSGE++ + WSKIQTPTDE+VVPYD+LAP PED                       MGCTGPKSV+EVRNG TFLDLIVI IE+LN KYGC+VPLLLM
Sbjct:   11 KIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCSVPLLLM 138          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA1_YEAST (UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=UGP1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.332e-14
Identity = 47/114 (41.23%), Postives = 61/114 (53.51%), Query Frame = 2
Query:  125 ENEKNGFINLVARYLSGESQH--V*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            ENE + F  L  RYL  +S    + W KI++P  + VV Y+ ++  PE+ +                     MGC GPKSV+EVR G TFLDL V  IE LN +Y  +VPLLLM
Sbjct:   49 ENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTS----MGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLM 158          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.002e-12
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 2
Query:  125 ENEKNGFINLVARYLSGESQ--HV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            + E + F +L +RYL  +++   + W  +++P  E VV YD++    E                        MGC GPKS++EVR+G +FLDL V  IE+LN KY  NVP +LM
Sbjct:   54 QKEMDNFFSLFSRYLQEDARGSEINWDLVESPKPEQVVEYDTIT---EAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVRQIEHLNRKYNVNVPFVLM 164          
BLAST of CN185793 vs. ExPASy Swiss-Prot
Match: UGPA1_ENCCU (UTP--glucose-1-phosphate uridylyltransferase OS=Encephalitozoon cuniculi GN=UGP1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.121e-12
Identity = 41/129 (31.78%), Postives = 62/129 (48.06%), Query Frame = 2
Query:   80 LTQLRSDVAGLNQINENEKN--GFINLVARYLSGESQHV*WSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVMEVRNGLTFLDLIVIHIENLNAKYGCNVPLLLM 460
            L +++  + GL + + N  N   F  L  RYL    + + W KI++P D IV        +PE   +                    MGC GPKS + +++G  F+DL+V  I  LN+KY  +VPL+LM
Sbjct:   35 LKEMKETLEGLKKSHPNPTNLDEFYRLFERYLRTRHEKIVWEKIRSPKDRIV----QYNEIPEPTEKSKELLRKLAILKLNGGLGTTMGCVGPKSAITIKDGKNFIDLVVKQIRYLNSKYKIDVPLILM 159          
The following BLAST results are available for this feature:
BLAST of CN185793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UGPA_SOLTU3.513e-4568.42UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN2.518e-4367.44UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA_PYRPY1.804e-4169.05UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA1_ARATH2.606e-4064.34UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_MUSAC9.901e-4063.28UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA2_ARATH2.881e-3962.02Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_HORVU1.581e-3761.72UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA1_YEAST9.332e-1441.23UTP--glucose-1-phosphate uridylyltransferase OS=Sa... [more]
UGPA1_SCHPO3.002e-1235.96Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA1_ENCCU5.121e-1231.78UTP--glucose-1-phosphate uridylyltransferase OS=En... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185793 ID=CN185793; Name=CN185793; organism=Citrus sinensis; type=EST; length=461bp
GATGATAACGTCTGATTCTTCTAGATTCATCTTCCTCGTTTAGACCGAAT
CGATCACATGGCCACTGCACGCCGAGAAGCTCACTCAGCTCAGATCTGAC
GTTGCTGGCCTCAATCAAATCAATGAAAATGAGAAAAATGGATTCATCAA
CCTCGTTGCTCGCTATCTAAGCGGCGAATCGCAACACGTGTAATGGAGCA
AAATCCAAACGCCTACTGATGAAATCGTAGTTCCTTATGACAGCTTGGCA
CCAGTTCCTGAAGATCCAGCGGAAACCAAAAAGCTTTTGGATGATCTTGT
CGTGTTGAAGCTCAATGGAGGTTTGGGAACCACAATGGGCTGCACTGGTC
CCAAGTCTGTTATGGAAGTTCGTAACGGGTTGACATTTCTTGACCTCATC
GTCATCCATATTGAGAATCTCAATGCTAAATATGGATGTAATGTTCCCCT
GCTACTCATGA
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