DC900033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 7.369e-86 Identity = 146/171 (85.38%), Postives = 161/171 (94.15%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LGRSGLRVSQL+YGAWV+FGNQLDV EAK+LLQ CRD GVNFFDNAEVYANGRAEEIMGQA+R+LGW+RSD+VVSTK+FWGGQGPNDKGLSRKHIVEG + SLKRLDMDYVDV+YCHRPD +TP+EETVRAMN+VID G AFYWGTSEWSAQQITEAW +A RLDLVGPI Sbjct: 5 NLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPI 175
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.499e-54 Identity = 94/171 (54.97%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL +DYVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI Sbjct: 41 NLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPI 211
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.360e-54 Identity = 93/171 (54.39%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI Sbjct: 41 NLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPI 211
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 5.695e-54 Identity = 93/171 (54.39%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI Sbjct: 41 NLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPI 211
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 5.695e-54 Identity = 93/171 (54.39%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI Sbjct: 41 NLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPI 211
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 9.714e-54 Identity = 93/171 (54.39%), Postives = 131/171 (76.61%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L PI Sbjct: 41 NLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPI 211
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.125e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G +++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG +ASL+RL ++YVDV++ +RPD +TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ Sbjct: 75 NLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPV 245
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ Sbjct: 75 NLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPV 245
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ Sbjct: 93 NLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPV 263
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ Sbjct: 82 NLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPV 252 The following BLAST results are available for this feature:
BLAST of DC900033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900033 ID=DC900033; Name=DC900033; organism=Citrus sinensis; type=EST; length=587bpback to top |