CN185769

Overview
NameCN185769
Unique NameCN185769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2395 contig Csv1_Contig2395:79..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 340.502 bits (872), Expect = 5.534e-93
Identity = 164/198 (82.83%), Postives = 183/198 (92.42%), Query Frame = -3
Query:  137 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFNL 730
            L  G+HACRRAN+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LGAD+I++VSTN+QD+ EEV KIQ  M TG+DVSFDC GFNKTMSTAL+ATRAGGKVCLVG+   EMTVPLTPAAAREVD+VG+FRY+NTWPLCLEFLRSGKIDVKPLITHRF FSQK+VEEAFETSARGG AIKVMFNL
Sbjct:  169 LSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.294e-41
Identity = 91/196 (46.43%), Postives = 131/196 (66.84%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G+HACRRA +     VL+ GAGPIGLV++L A+A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE +   +G+  +V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP+ +  L S  ++VKPL+THRF    ++  EAFETS + G  +KVM
Sbjct:  157 LSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVM 346          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.882e-41
Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G+HACRRA +     VL+ GAGPIGLV +L A+A GA ++V+ D+   RLS AKE+GAD I+++S    +  E  +K++  +G+  +V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP+ +  L S  ++VKPL+THRF    ++  EAFETS + G  +KVM
Sbjct:  155 LSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPE--EIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVM 344          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 165.236 bits (417), Expect = 3.186e-40
Identity = 87/196 (44.39%), Postives = 131/196 (66.84%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G++ACRR ++     VL+ GAGPIG+VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA REVD+ GVFRY NTWP+ +  L S  ++VKPL+THRF    ++  EAFET A+ G  +KVM
Sbjct:  158 LSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTWPMAVSMLASKTLNVKPLVTHRFPL--EKAVEAFET-AKKGLGLKVM 347          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 4.161e-40
Identity = 89/196 (45.41%), Postives = 128/196 (65.31%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE +   +G   +V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA REVD+ GVFRY NTWP+ +  L S  ++VKPL+THRF    ++  EAFET  + G  +K+M
Sbjct:  158 LSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 9.270e-40
Identity = 86/196 (43.88%), Postives = 129/196 (65.82%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G++ACRR ++     VL+ GAGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA REVD+ GVFRY NTWP+ +  L S  ++VKPL+THRF    ++  EAFET A+ G  +KVM
Sbjct:  158 LSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTWPMAISMLASKTLNVKPLVTHRFPL--EKAVEAFET-AKKGVGLKVM 347          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.581e-39
Identity = 88/196 (44.90%), Postives = 127/196 (64.80%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE +   +G   +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA REVD+ GVFRY NTWP+ +  L S  ++VKPLITHRF    ++  EAFET  + G  +K+M
Sbjct:  158 LSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 4.601e-39
Identity = 86/196 (43.88%), Postives = 128/196 (65.31%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 730
            L  G+HACRR  +     VL+ GAGPIG+V++L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE +   +G   +V+ +C G   ++   + ATR+GG + LVG+G    T+PL  AA REVD+ GVFRY NTWP+ +  L S  +++KPL+THRF    ++  EAFET  + G  +K+M
Sbjct:  158 LSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNTWPVAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.434e-32
Identity = 80/196 (40.82%), Postives = 115/196 (58.67%), Query Frame = -3
Query:  131 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFNL*N 718
            +HAC RA I   + ++I+GAGPIG++  + A+A GA +I++ DV   RL  A ELGADN++ V     D  E VEKI K +G   DVS D  G+      AL  T+  G V +VG+    + +PL+ A  REVDVVG FR  NT+   L  + SG I +   ITHRF  +  + +EA +  A+ G A+K++ ++ N
Sbjct:  157 IHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGASKIILTDVVQSRLDAALELGADNVLLVRREYTD-EEVVEKIVKLLGDRPDVSIDACGYGSAQRVALLVTKTAGLVLVVGIADKTVELPLSQALLREVDVVGSFRIMNTYQPALAAVSSGAIPLDKFITHRFPLN--KTKEALDL-AKSGAAMKILIHVQN 348          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 8.697e-30
Identity = 65/175 (37.14%), Postives = 109/175 (62.29%), Query Frame = -3
Query:  200 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKE 721
            G+HA  R  + P + + IMG GP+GL+ +  A+AFGA  I++ D++  RL  AK++GA +I+ +    QD  EE++ I      G+DV+++ AG    + +AL++ R GGK+ +VG+   +E+ + +   A  E+D+ G+FRY NT+P  +EFL SG +D K L+T ++   Q +
Sbjct:  161 GIHAAARTKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINIRE--QDALEEIKTITN--DRGVDVAWETAGNPAALQSALASVRRGGKLAIVGLPSQNEIPLNVPFIADNEIDIYGIFRYANTYPKGIEFLASGIVDTKHLVTDQYSLEQTQ 331          
The following BLAST results are available for this feature:
BLAST of CN185769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
IDND_VITVI5.534e-9382.83L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_BOVIN1.294e-4146.43Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_SHEEP2.882e-4145.13Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_RAT3.186e-4044.39Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_HUMAN4.161e-4045.41Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_MOUSE9.270e-4043.88Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_PONAB1.581e-3944.90Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_MACFA4.601e-3943.88Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_BOMMO1.434e-3240.82Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
DHSO_BACSU8.697e-3037.14Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185769 ID=CN185769; Name=CN185769; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTGAGAATCTGAATTTTATTTTGTAATAGATAGAAATAAAGTAA
TATGCTACACTTTGATTCATATTACTCGGCGACAATTCCATTTTATTTCA
TCTTTTGCCCAAACGTTTACTTTACGTTGTATTTTACAGATTAAACATGA
CCTTGATTGCAGTACCACCACGAGCACTTGTTTCAAAGGCCTCTTCCACT
TCTTTCTGGGAGAAACCAAACCTATGCGTGATAAGGGGCTTTACATCAAT
CTTTCCGCTTCTAAGGAACTCCAGACACAGTGGCCAGGTGTTCTTGTAGC
GAAACACCCCCACCACATCCACCTCCCTTGCAGCAGCCGGAGTGAGTGGG
ACAGTCATTTCATGATGACCCATCCCCACGAGGCAAACTTTACCACCTGC
ACGAGTAGCACTCAGTGCTGTTGACATGGTTTTGTTAAAGCCTGCACAAT
CAAAGCTCACATCTATTCCTGTCCCCATGGCTTTCTGTATCTTTTCCACT
TCTTCAGCTATGTCCTGCAAATTTGTTGAAACTTTAACAATATTATCTGC
ACCAAGTTCCTTTGCAACAGATAAACGATAGTCATCCACATCCACAATGA
CAATTCTAGGAGCTCCAAAAGCACGAGCTCCTAGCATTGTGACAAGTCCT
ATGGGCCCTGCTCCCATGATAAGCACATTTGTCTCAGGACCGATATTGGC
ACGGCGGCAGGCATGAAGACCAAACCTCAAGG
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