CN185748

Overview
NameCN185748
Unique NameCN185748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10711 contig Csv1_Contig10711:11..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GTG2_ARATH (GPCR-type G protein 2 OS=Arabidopsis thaliana GN=GTG2 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.086e-50
Identity = 78/119 (65.55%), Postives = 83/119 (69.75%), Query Frame = -1
Query:  188 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVXXXXXXXXXXXAHYTSRQADKHPID 544
            QYISLLFIGMLIV+SVRGFL N+MK                    SEIMGMYF+SSILLIRKSL  EYR IIT+VLGG+IQFDFYHRWFDAIFV           AHYTSRQ DKHPID
Sbjct:  349 QYISLLFIGMLIVISVRGFLTNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQIDKHPID 467          

HSP 2 Score: 76.6406 bits (187), Expect = 6.086e-50
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = -2
Query:  538 YKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQFCSI 678
            YKM+KSLQSVVFKEAG+ DPVTM ISIFLQFFDIG++A LLSQ+ S+
Sbjct:  307 YKMLKSLQSVVFKEAGTKDPVTMMISIFLQFFDIGVDAALLSQYISL 353          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GTG1_ARATH (GPCR-type G protein 1 OS=Arabidopsis thaliana GN=GTG1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.971e-47
Identity = 76/119 (63.87%), Postives = 83/119 (69.75%), Query Frame = -1
Query:  188 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVXXXXXXXXXXXAHYTSRQADKHPID 544
            QYISLLFIGMLIV+SVRGFL N+MK                    SEIMGMYF+SSILLIRKSL  EYR IIT+VLGG+IQFDFYHRWFDAIFV           AHYTSRQ+DKH I+
Sbjct:  350 QYISLLFIGMLIVISVRGFLTNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFDFYHRWFDAIFVASAFLSLVLLSAHYTSRQSDKHAIE 468          

HSP 2 Score: 70.4774 bits (171), Expect = 5.971e-47
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -2
Query:  538 YKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQFCSI 678
            YKM+KSLQSVVFKEAG+ DPVT  ISIFL+ FDIG++A LLSQ+ S+
Sbjct:  308 YKMLKSLQSVVFKEAGTKDPVTTMISIFLRLFDIGVDAALLSQYISL 354          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GPR89_HUMAN (Protein GPR89 OS=Homo sapiens GN=GPR89A PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.172e-20
Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  263 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFV 544
            Q+IS + +G++IV S+RG L+ + K                     +IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+
Sbjct:  341 QHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLA--QIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFL 431          

HSP 2 Score: 30.0314 bits (66), Expect = 3.172e-20
Identity = 17/54 (31.48%), Postives = 27/54 (50.00%), Query Frame = -2
Query:  517 YKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQFCSISPFCLLG 678
            +K+  +  ++VF   G  DPVT  I I + +  I  + +  SQ  S   F L+G
Sbjct:  299 WKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHIS---FILVG 349          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GPR89_CHICK (Protein GPR89 OS=Gallus gallus GN=GPR89A PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.172e-20
Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  263 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFV 544
            Q+IS + +G++IV S+RG L+ + K                     +IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+
Sbjct:  341 QHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLA--QIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFL 431          

HSP 2 Score: 30.0314 bits (66), Expect = 3.172e-20
Identity = 17/54 (31.48%), Postives = 27/54 (50.00%), Query Frame = -2
Query:  517 YKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQFCSISPFCLLG 678
            +K+  +  ++VF   G  DPVT  I I + +  I  + +  SQ  S   F L+G
Sbjct:  299 WKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHIS---FILVG 349          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GP89C_HUMAN (Putative protein GPR89C OS=Homo sapiens GN=GPR89C PE=5 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.197e-20
Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  263 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFV 544
            Q+IS + +G++IV S+RG L+ + K                     +IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+
Sbjct:  206 QHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLA--QIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFL 296          

HSP 2 Score: 30.0314 bits (66), Expect = 3.197e-20
Identity = 17/54 (31.48%), Postives = 27/54 (50.00%), Query Frame = -2
Query:  517 YKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQFCSISPFCLLG 678
            +K+  +  ++VF   G  DPVT  I I + +  I  + +  SQ  S   F L+G
Sbjct:  164 WKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHIS---FILVG 214          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GPR89_BOVIN (Protein GPR89 OS=Bos taurus GN=GPR89A PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17
Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = -1
Query:  263 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFV 544
            Q+IS + +G++IV S+RG L+ + K                     +IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+
Sbjct:  309 QHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLA--QIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFL 399          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GPR89_MOUSE (Protein GPR89 OS=Mus musculus GN=Gpr89a PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17
Identity = 47/94 (50.00%), Postives = 61/94 (64.89%), Query Frame = -1
Query:  263 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFV 544
            Q+IS + +G++IV S+RG L+ + K                     +IMGMYFVSS+LLIR S+  EYR IITEVL GE+QF+FYHRWFD IF+
Sbjct:  341 QHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLA--QIMGMYFVSSVLLIRMSMPPEYRTIITEVL-GELQFNFYHRWFDVIFL 431          
BLAST of CN185748 vs. ExPASy Swiss-Prot
Match: GPR89_DICDI (Protein GPR89 homolog OS=Dictyostelium discoideum GN=DDB_G0283855 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.379e-16
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = -1
Query:  263 QYISLLFIGMLIVMSVRGFLMNVMKXXXXXXXXXXXXXXXXXXXXSEIMGMYFVSSILLIRKSLAIEY-RIIITEVLGGEIQFDFYHRWFDAIFV 544
            Q+IS + +G++   S+RGFL  ++K                     ++MGMYF+SS+L++R S+   Y R I+T++LG +I+F FYHRWFD IF+
Sbjct:  432 QHISFILVGLMTASSIRGFLNQILKVFHEYSSSLSSNNIVLILA--QVMGMYFISSVLMMRTSMPEIYTRFIVTQILG-DIEFSFYHRWFDFIFI 523          

HSP 2 Score: 32.7278 bits (73), Expect = 2.379e-16
Identity = 18/50 (36.00%), Postives = 27/50 (54.00%), Query Frame = -2
Query:  517 KSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQFCSISPFCLLG 666
            KS  ++VF   G +DPVT  + I L++F   ++    SQ  S   F L+G
Sbjct:  394 KSALNIVFDRRGGMDPVTRGLDIALRYFHFQVDVTFWSQHIS---FILVG 440          
The following BLAST results are available for this feature:
BLAST of CN185748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GTG2_ARATH6.086e-5065.55GPCR-type G protein 2 OS=Arabidopsis thaliana GN=G... [more]
GTG1_ARATH5.971e-4763.87GPCR-type G protein 1 OS=Arabidopsis thaliana GN=G... [more]
GPR89_HUMAN3.172e-2050.00Protein GPR89 OS=Homo sapiens GN=GPR89A PE=1 SV=1[more]
GPR89_CHICK3.172e-2050.00Protein GPR89 OS=Gallus gallus GN=GPR89A PE=2 SV=1[more]
GP89C_HUMAN3.197e-2050.00Putative protein GPR89C OS=Homo sapiens GN=GPR89C ... [more]
GPR89_BOVIN1.955e-1750.00Protein GPR89 OS=Bos taurus GN=GPR89A PE=2 SV=1[more]
GPR89_MOUSE7.427e-1750.00Protein GPR89 OS=Mus musculus GN=Gpr89a PE=2 SV=2[more]
GPR89_DICDI2.379e-1638.95Protein GPR89 homolog OS=Dictyostelium discoideum ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185748 ID=CN185748; Name=CN185748; organism=Citrus sinensis; type=EST; length=679bp
CCCTTTTTTTTTTTTTATTCTATTTATTATTGAGAATAGTTTGCAGAAAC
CTAATGCCCATTTAATGAGACATACTGCAGGTGAATTGTTGCAGAACAAG
AAAGAATCCTATCAGTGGATGACTAATTGTTGAGAACGACTCATAATTAA
TGAGTCACTAAACACATACTTACATATGAACACGTTAATCAATTGGGTGC
TTATCAGCCTGGCGAGATGTATAATGTGCAGAAAGCAAGATAAGAGAGAG
GAAAGCACTGGCTACAAAGATTGCATCAAACCACCGATGGTAAAAGTCAA
ATTGAATTTCCCCACCCAATACCTCTGTTATGATAATCCTGTATTCAATG
GCAAGACTTTTTCTTATCAAAAGAATTGAAGAGACAAAATACATTCCCAT
AATTTCAGACAGGAAAAGTACAACATTGCTGGAAGATCCACTCCCTACTC
TGGAGACTGCAAAGAAAAACTTCATTACGTTCATTAAGAAACCCCGTACC
GACATAACGATCAGCATCCCAATAAACAAAAGGGAGATATACTGCAGAAC
TGTGATAATAATTGAGCATTGATTCCTATATCAAAGAACTGCAAGAATAT
GCTAATTGTCATTGTCACAGGATCAACTGAACCAGCCTCCTTGAAAACAA
CACTCTGTAAAGACTTGATCATTTTATAA
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