CN185704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: RH38_ORYSJ (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica GN=Os03g0158200 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 51/78 (65.38%), Postives = 56/78 (71.79%), Query Frame = -3 Query: 417 QQQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRN--SDED 644 Q QVNL++NYD P+K G EPD EVYLHRIGRAGRFGRKG VFNLL D +M KIE YF V EVRN S+ED Sbjct: 416 QAQVNLVINYDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGETDNTVMRKIETYFQHNVPEVRNWQSEED 493
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: RH38_ARATH (DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana GN=RH38 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 7.193e-19 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = -3 Query: 417 QQQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLM-DGDDMIIMEKIERYFDIKVTEVR--NSDED 644 QQ+VNL+VNY+ P K+ EPD EVYLHR+GRAGRFGRKG VFNLL+ DG D +MEKIE+YF+ V E++ NS+E+ Sbjct: 406 QQRVNLVVNYNLPTKYETG-EPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEIKSWNSEEE 483
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: DDX25_HUMAN (ATP-dependent RNA helicase DDX25 OS=Homo sapiens GN=DDX25 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12 Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 417 QQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRNSDED 641 +QV ++VN+D PVK G+ EPD E YLHRIGR GRFG+KG+ FN++ + D++ + KI+ +F+ + ++ D D Sbjct: 405 KQVTIVVNFDLPVKQGE--EPDYETYLHRIGRTGRFGKKGLAFNMI-EVDELPSLMKIQDHFNSSIKQLNAEDMD 476
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: DBP5_USTMA (ATP-dependent RNA helicase DBP5 OS=Ustilago maydis GN=DBP5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = -3 Query: 423 QQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRNSD 641 QQV L++NYD P+ E D E YLHRIGR GRFGRKGV N + D M++IE+ ++T V +D Sbjct: 369 QQVTLVINYDMPLTQTG--EADAETYLHRIGRTGRFGRKGVSINFVHDQQSWSYMDQIEKALKCQITRVATND 439
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = -3 Query: 417 QQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRNSDED 641 Q V++++NYD P+K EPD E YLHRIGR GRFGR GV + + D + KI +++I + ++ D D Sbjct: 375 QSVSMVINYDIPMKGRSDFEPDPETYLHRIGRTGRFGRVGVSISFVFDRKSYDALNKIAHHYNIDLIKLNQDDWD 449
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: DDX25_RAT (ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11 Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = -3 Query: 417 QQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRNSDED 641 +QV ++VN+D PV + EPD E YLHRIGR GRFG+KG+ FN++ + D + ++ KI+ +F+ + ++ D D Sbjct: 405 KQVTIVVNFDLPVNQSE--EPDYETYLHRIGRTGRFGKKGLAFNMI-EVDKLPLLMKIQDHFNSSIKQLDPEDMD 476
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: DDX25_MOUSE (ATP-dependent RNA helicase DDX25 OS=Mus musculus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11 Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = -3 Query: 417 QQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRNSDED 641 +QV ++VN+D PV + EPD E YLHRIGR GRFG+KG+ FN++ + D + ++ KI+ +F+ + ++ D D Sbjct: 406 KQVTIVVNFDLPVNQSE--EPDYETYLHRIGRTGRFGKKGLAFNMI-EVDKLPLLMKIQDHFNSNIKQLDPEDMD 477
BLAST of CN185704 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11 Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = -3 Query: 417 QQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDIKVTEVRNSDED 641 +QV ++VN+D PV + EPD E YLHRIGR GRFG+KG+ FN++ + D + ++ KI+ +F+ + ++ D D Sbjct: 405 KQVTIVVNFDLPVNQAE--EPDYETYLHRIGRTGRFGKKGLAFNMI-EVDKLPLLMKIQDHFNSSIKQLDPEDMD 476 The following BLAST results are available for this feature:
BLAST of CN185704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185704 ID=CN185704; Name=CN185704; organism=Citrus sinensis; type=EST; length=646bpback to top |