CN185699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.481e-64 Identity = 127/151 (84.11%), Postives = 134/151 (88.74%), Query Frame = -2 Query: 284 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 736 DIIDPALLRPGRLDQLIYIPLPDEESR QIFK+CLRKSPV+KDVDLRALAKYTQGFSGADITEICQR+CKYAIRENIEKDIE+ER+R+E+P EIKA ESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA Sbjct: 631 DIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESP-EAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 780
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.303e-62 Identity = 123/152 (80.92%), Postives = 131/152 (86.18%), Query Frame = -2 Query: 281 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAA 736 DIID ALLRPGRLDQLIYIPLPDE+SRL IFKA LRKSP++KDVD+ ALAKYTQGFSGADITEICQRACKYAIRENIEKDIE+E+RRSENP EIKA ESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF ++A Sbjct: 631 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSA 782
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.007e-62 Identity = 123/152 (80.92%), Postives = 131/152 (86.18%), Query Frame = -2 Query: 281 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAA 736 DIIDPALLRPGRLDQLIYIPLPDE+SR QIFKACLRKSP+SKD+DLRALAK+TQGFSGAD+TEICQRACKYAIRENIEKDIERE+RR ENP EIK ESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF D + Sbjct: 631 DIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENP-DSMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADTS 781
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.949e-61 Identity = 122/152 (80.26%), Postives = 132/152 (86.84%), Query Frame = -2 Query: 284 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENP-XXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 736 DIIDPALLRPGRLDQLIYIPLPDE+SR QIFKACLRKSP++K+VDLRALA++TQGFSGADITEICQRACKYAIRENIEKDIERER+ ENP EIKA ESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP++ Sbjct: 631 DIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPES 782
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.546e-61 Identity = 124/153 (81.05%), Postives = 129/153 (84.31%), Query Frame = -2 Query: 281 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENP-XXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAA 736 DIID ALLRPGRLDQLIYIPLPDE+SRL IFKACLRKSPV+KDVD+ ALAKYTQGFSGADITEICQRACKYAIRENIEKDIE ERRRS+NP EI+A ESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF A Sbjct: 630 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTA 782
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.683e-50 Identity = 104/151 (68.87%), Postives = 117/151 (77.48%), Query Frame = -2 Query: 284 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 736 DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSP+SKDVDL LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R NP EI+ E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP + Sbjct: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSS 776
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = -2 Query: 290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736 DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R NP EI+ E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP Sbjct: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = -2 Query: 290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736 DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R NP EI+ E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP Sbjct: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = -2 Query: 290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736 DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R NP EI+ E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP Sbjct: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = -2 Query: 290 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXEIKAVPSAESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 736 DIIDPA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL LAK T GFSGAD+TEICQRACK AIRE+IE +I RER R NP EI+ E+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP Sbjct: 627 DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774 The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bpback to top |